2010 Bar Harbor Agenda

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Tuesday September 7

  • 10:00-10:30: Welcome; Review of schedule and agenda (Judy)
  • 10:30 - Noon: Suzi, outline & discuss current draft of [[1]] specific aims.
  • Noon-1: Lunch
  • 1:00-2:30: Annotation Report (Rama & Rachael)- File:BHB2010.pdf
    1. recent projects - notes/accomplishments
    2. initial thoughts on grant renewal
    3. objectives for the next 4 & 12 months (timeline and objectives)
      • Reporting standards
  • 2:30-3:00: break
  • 3:00-4:30: Ref. Genome Report (Pascale & Kara)

Pascale's slides: http://gocwiki.geneontology.org/index.php/File:2010-09-BHB-RefG-progress-report-Pascale.pdf
Kara slides: http://gocwiki.geneontology.org/index.php/File:GO_BarHarbor2010Kara.pdf

Wednesday September 8

  • 8:30-10:00 Ontology Development Report (David and Jane)
    1. recent projects - notes/accomplishments
    2. initial thoughts on grant renewal
    3. objectives for the next 4 & 12 months (2010 and 2011 timelines and objectives)
  • 10:00-10:30 Break
  • 10:30-12:00 Software and Infrastructure Report (Chris, Suzi & Mike C)
    1. recent projects - notes/accomplishments
      • OBO-Edit update. isa-closure/MIREOT support (Amina) (5 mins)
      • AmiGO labs update (Chris and Seth) (5 mins)
      • Galaxy integration (Chris) (5 mins)
    2. objectives for the next 4 & 12 months & 5 years and renewal thoughts (timeline and objectives) (1 hr). Presentation: Media:software-group-report-bar-harbor-2010.pdf
  • 12:00-1:00: Lunch (OBO-Edit Working Group Lunch Meeting)
  • 1:00-3:00 Inter-Operational issues
    We will take this time to discuss solutions for infrastructure and best practices where the respective project teams must connect and communicate more effectively.
    1. Annotation group:
      • Annotation & reference genome groups communication (Pascale and Rama)
    2. Reference genome group:
      • What would be the best forum to discuss annotation and ontology issues ? wiki? SF? we've been doing a bit of both, plus email. It should be more formalized.( Pascale, Mike L)
    3. Ontology development:
      • Ontology and annotation (Jane & Rama) : how do ontology development get communicated to the annotation group? do we need to improve communication channels?
    4. Software and Infrastructure:
      • Delivery of GAFs to MODs (Suzi)
  • 3:00 Break for a Hike
  • 7:00 Dinner at HighSeas

Thursday September 9

  • 8:30-10:00: Grant planning discussion
    1. Review of Timelines
    2. Refinement of aims and objectives (Judy: summary of discussions up to this point)
      • Overall statement of GOC accomplishments: progress report
      • Rolea and future of subcontracts to MODs supplemental grants to Princeton, ARRA funding to CL
      • Literature annotation (and ontology development)
      • Phylogenetic annotation (and ontology development)
      • Community annotation (and ontology development)
      • What new priorities, strategies, technology aspects are we proposing
        • Groups we might work more closely with (and perhaps additional funding opportunities): PRO, LAMHDI, ICGC, bacterial, Reactome,...
        • Expressivity of annotations: LEGO (Paul T), Annotation IDs and Dependency (Alex)
      • Distribution channels and user support
  • 10:00-10:30 - break
  • 10:30-11:30 Refinement of aims and objectives cont.
  • 11:30-noon Review of action items
  • noon - 1 pm Lunch
  • End of Meeting
GOC Bar Harbor Attendees