2017 November Berkeley GO Developers Meeting

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Agenda (Draft)

Logistics

Agenda

zoom links will be added for open sessions

mon

Seth/Tremayne

am

rm 258 (Seth)

  • 10.30am Tremayne welcome
  • 11.00am bbop group meeting
  • 11.30am lunch

pm

rm 257

  • 1-1.30pm OPEN SESSION Noctua and GOCAMs (Chris)
  • 1.30-2pm OPEN SESSION The noctua workbench system (Seth)
  • 2-5pm: Noctua workbench hacking (Seth/Tremayne/Eric)

tue

am

rm 258 (Seth)


  • 9.30am-11.30am Noctua workbench hacking
  • 11.30am lunch

pm

rm 257

  • 1pm-2pm OPEN SESSION Intro to SPARQL (Eric)
  • 2pm-3pm GO pipeline (Eric, Seth)
  • 3pm-5pm hacking

evening

Nathan and Deepak arrive

wed

Nathan and Deepak arrive

Apollo breakout, rm 248

9.30am-11.30 deepak/nathan/suzi/EricY hacking

Noctua breakout, rm 258

9.30am-11.30 Seth/Tremayne/Eric hacking

11.30am lunch

1pm-5pm

deepak hanging out with group noctua hacking

thu

9.30am-11.30am

  • deepak hacking with Eric D on ontobio
  • tremayne hacking with anushya? rm248

11.30am lunch

pm

rm248

  • 12-1 monarch group meeting

General session - all bbop group members should attend

may also invite Andrew, Marcin

  • 2pm-4pm BBOP APIs and data models: Chris, Seth
  • 4pm-5pm API discussion

evening

group dinner TBD

fri

open ended

am

rm 153

  • Anushya and Tremayne meeting

pm

rm 248

Accommodations

You can get the lab rate and any of these hotels:

Parking

Park temporarily and grab a parking pass from the person at the gate, you can then park in the garage:

Meeting Location

Berkeley Lab, Aquatic Park Offices

Lawrence Berkeley National Laboratory (LBNL), Aquatic Park office of Biosciences Operations at Berkeley Physical address: 717 Potter Street, Berkeley, CA 94710

Meeting room: room 181

Travel between hotel and meeting

Aim to be at the lab for 9.30am


Participants

USC:

  • Tremayne Mushayahama
  • Anushya?

LBL:

  • Chris Mungall
  • Eric Douglass
  • Seth Carbon
  • HyeongSik Kim
  • Suzi Lewis