Specifications for future releases of AmiGO. See the AmiGO: Mock-ups page for implementations of these specifications.
I like how we have mockups without specifications.
Here are some bare bones specifications:
AmiGO has two primary purposes:
1. Browsing the ontology
2. Displaying annotations (mappings) of Genes to GO terms
The current implementation has 3 different searching approaches to access this data:
- search by term name
- search by gene name/id
- Blast vs annotated sequences (GOst)
GOst can also be used internally from a particular annotated sequence
- See also a set of possible AmiGO: Workflows