AmiGO: Specifications

Specifications for future releases of AmiGO. See the AmiGO: Mock-ups page for implementations of these specifications.

I like how we have mockups without specifications.

Here are some bare bones specifications:

AmiGO has two primary purposes:

1. Browsing the ontology

2. Displaying annotations (mappings) of Genes to GO terms

The current implementation has 3 different searching approaches to access this data:

• search by term name
• search by gene name/id
• Blast vs annotated sequences (GOst)

GOst can also be used internally from a particular annotated sequence

• See also a set of possible AmiGO: Workflows