AmiGO 2 Manual: Deprecated Features
As AmiGO 2 moves forwards and offers new features, there a few features that are deprecated and will eventually no longer be offered.
This can still be used at the old AmiGO 1.x site: http://amigo1.geneontology.org/cgi-bin/amigo/blast.cgi
We have switched over to a more abstracted system, currently using PANTHER as the engine. This functionality is available in AmiGO and will soon be available from the GO homepage.
This can still be used at the old AmiGO 1.x site: http://amigo1.geneontology.org/cgi-bin/amigo/term_enrichment
This can still be used at the old AmiGO 1.x site: http://amigo1.geneontology.org/cgi-bin/amigo/slimmer