| Project
| March 2010
| April 2010
| May 2010
| June 2010
| July 2010
| August 2010
| September 2010
| October 2010
| November 2010
| December 2010
|
| Jamborees for Reference Genome
| Ongoing
|
|
|
|
|
|
|
| Annotation Jamboree on transcription (DONE)
|
|
| Outreach to new groups
|
|
| document policy/guidelines for new annotating groups/jamborees (start)
|
|
| document policy/guidelines for new annotating groups/jamborees (finish)
|
|
|
|
|
| Enforce annotation guidelines (absolute checks-annotations are wrong)
|
| phase 1 QC checks for protein binding annotations
| request for QC checks (DONE)
| formulate phase 2 QC checks, come up with pipeline (schedule for running these scripts etc.)
| request for phase 2 QC checks
| phase 1 QC checks in production
|
| phase 2 QC checks in production
|
|
|
| Soft QC checks (annotations that need to be reviewed but not removed)
|
|
| gather specs for taxon triggers, matrix checks, other checks from annotation WGs
| formulate soft QC checks, come up with pipeline (schedule for running these scripts etc.)
|
|
|
| soft QC checks in production
|
|
|
| Documentation of annotation guidelines
|
| working groups formed (DONE)
|
| complete at GO Camp (DONE)
|
| guidelines in production (DONE)
|
|
|
|
|
| Documentation of evidence code guidelines
|
| agreed to adopt a new evidence code system
| initiate conversation with ECO group and ?
| ratify IMP, RCA, IGI documentation
| work on details
|
|
| evidence code proposal presented to larger GOC (DONE. Comments received for second draft of proposal)
|
| new ECO in production
|
| GAF file format
|
| guidelines for GAF2.0 (column 16)
|
| continue discussion on col-16 content at GO camp (DONE)
|
|
|
|
| Guidelines for use of Cell Type in Col. 16 sent to GO list for comment
|
|
| Loading PAINT GAF files
|
|
| feedback
| discussion at GO camp
|
| incorporate PAINT inferences at MODs
|
|
|
|
|
| Loading other GAF files
|
|
| initiate talk with Chris about inter-ontology inferences
| send email out to MODs to review/give feedback
| establish pipeline (resting place, updating schedule etc.)
| incorporate inter-ontology inferences
|
|
|
|
|
| Educate curators on ontology development
| ongoing
|
|
|
|
|
|
|
|
|
|
| AmiGO/QuickGO displays
| ongoing
|
|
|
|
|
|
| QuickGO interface re-development made public
|
|
|