Annotation Conf. Call, June 12, 2012

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Agenda

1) Marijn Berg - project on improving protein binding annotations using InterPro domains

2) Hard QC check for IKR annotations. Annotations that violate the following rules will be filtered

  • Annotations with IKR ev.code should have NOT qualifier in Column 4
  • Annotations with GO_REF:0000047 should have an ID in column 8 (with/from)

3) Annotation Extension field documentation

  • Any outstanding issues with the documentation? Can it go on the website?

http://wiki.geneontology.org/index.php/Annotation_Extension

4) Cell fraction terms Most of us are in agreement to obsolete these terms (http://wiki.geneontology.org/index.php/Annotations_to_Cell_Fraction-type_terms). Please let us know if there are any outstanding issues/concerns. If not we can request the ontology editors to obsolete them.

5) Jenkins testing environment