Annotation Conf. Call 2019-03-12

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Agenda

  • Note that the US went on daylight savings this past weekend, so the time difference between the US and UK and Europe is now 4 and 5 hours, respectively.

GOC Meeting, April 11th and 12th, Cambridge, UK

Pipeline Reports

Annotation Review

Stemming from work on this ontology ticket: is an adaptor just another word for a scaffold protein?

GPAD/GPI Specifications

  • New specs are nearly ready
  • Outstanding issues:
    • Standardized headers
    • Use of SO/MSO to describe entities in gpi file
      • Discussion on Alliance All-Hands call?
    • Other entities, e.g. variations? fish?

Annotation Tracker

  • Please review tickets you have entered
  • If they can be closed, please do
  • If they are unresolved or blocked, leave open

Minutes

  • On call: David, Dustin, Edith, Giulia, Harold, Helen, Karen, Kevin, Kimberly, Marie-Claire, Midori, Monika, Pascale, Patrick, Paul T, Rob, Sabrina, Seth, Stacia, Suzi A, Laurent-Philippe

GOC Meeting, April 11th and 12th, Cambridge, UK

  • Deadline for registering for meeting, and dinner if you want to attend, is Thursday, March 28th

Pipeline Reports

  • Please continue to check annotation reports
  • Not all GO and annotation rules are fully incorporated into the reports, yet, but they will be at some point in the future

Annotation Review

  • Please review new tickets on adaptor, scaffold, and structural molecule activities
  • Also, please check for any outstanding annotation review tickets to which you've been assigned
  • We're aiming to close out as many tickets as feasible before the April meeting

GPAD/GPI Specifications

  • Specs are nearly ready; curators should start looking at them
  • Other entities, e.g. variations, fish, may be added to the gpi file
    • Please think about what other entities your group uses for curation so we can develop specs for including them