Annotation Conf. Call 2021-02-02
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Agenda and Minutes
GAF 2.2
- Discussion of where each group is at, any remaining issues to address
- AI: Discuss with Seth use of new relations in GPAD 1.2 as a way of moving us forward with GAF 2.2 more efficiently
- As soon as the February release is done (it's underway), the pipeline will switch over to consuming and generating the GAF2.2 files
- Relations from GAF2.2 will be included in GPAD1.2, so groups like UniProt who consume PAINT GPAD1.2 from GO can get the new relations there
- AI: Questions for Seth - testing GAF 2.2 files; groups have put test files in the GAF 2.2 testing github ticket
- Testing will commence once the February release is done
- AI: Managers call: will discuss options and priorities for starting the official March release early so we can get it out the door as close to March 1st as possible
GOC Meetings
- Virtual Consortium Meeting -Monday May 3rd -Thurs May 6th
- Agenda/Minutes - please suggest topics for discussion and/or breakout groups
- Next week (week of February 8th) is a no GO meetings week, but there will be an Ontology Editors Jamboree!
- If you have ontology tickets that you'd like to see addressed, please let Pascale know
Other issues
- Malcolm raised the issue of formatting for Xenbase gene identifiers in the table for browsing GO-CAMs on the GO site
- Ticket: https://github.com/geneontology/noctua/issues/706
- Jim and Laurent-Philippe looking into this
- Snapshot releases are up and running again after brief outage last week
- NEO pipeline - on hold until we can fix an issue with the RGD GAF that is linking two different species to one entity
Attendance
- On call: Bob, Christina, David, Debby, Dmitry, Dustin, Edith, Giulia, Helen, Karen, Kimberly, Li, Malcolm, Midori, Patrick, Pascale, Rob, Ruth, Sabrina, Seth, Stacia, Suzi, Tanya