GO-CAM June 14th, 2017

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Zoom URL

https://stanford.zoom.us/j/679970729

Agenda

Recent Software Updates

  • Editors' preview now available.
  • Export GPAD menu option now using reasoner (ie Jim's code; Heiko's is retired)

Priority list

  • Handling evidence properly
    • Complex model resolution to specify gene products along with evidence.

http://noctua.berkeleybop.org/editor/graph/gomodel:586fc17a00001081

http://noctua.berkeleybop.org/editor/graph/gomodel:5745387b00001750

    • Karen's concerns regarding evidence usage and mapping
    • Creating biological process to generate regulation annotations.

http://noctua.berkeleybop.org/editor/graph/gomodel:586fc17a00000366

  • Generating a tabular interface
  • Filtering GPAD annotations
    • Regulation annotations when a named class exists

http://noctua.berkeleybop.org/editor/graph/gomodel:586fc17a00000366

    • Causal annotations to molecular functions

http://noctua.berkeleybop.org/editor/graph/gomodel:55c3ef4c00000001

  • Curators should evaluate their workflow for areas where we can improve efficiency - high priority
  • Import existing CC and BP annotations
  • Documentation

Review of github Tickets

Minutes

  • On call: Sabrina, Emily, Seth, DavidH, Karen, Stacia, Jim

Software Updates