Managers 30July08
GO Managers, Weds. July 30th, 2008 8a.m. PDT, 9a.m. MDT, 10a.m. CDT, 11a.m. EDT, 4p.m. BST
Agenda/chair: Jen
Minutes: Jane
Present: Jane, Jen, Midori, Pascale, Mike, Suzi, Michael
Action items from July 16
- Chris: Add technical content to MF-BP link announcement email draft
- Done.
- Jen: Send supplementary data from Paul Dobson drug transporter review to Judy
- Jen - awaiting permission from the author and information on which species the annotations come from.
- Managers and (especially) PIs look at the MF-BP link email - we want to send it out ASAP.
- Suzi was worried that the example was potentially confusing (regulation of kinase activity (BP) and kinase regulator activity (MF) seems redundant). David and Tanya to find different example.
- Pascale:GOC/SAB meeting: now booked; Were the SAB members contacted about the dates? (Action item for Judy.)
- Done we think - can Judy update the managers at the next meeting?
- David:submitting GO for review to become an OBO-foundry ontology. This is the outcome of the OBO-foundry meeting that Jane and I attended last week. Suzi or Michael to be GO representative?
- Should probably be Judy or Mike (i.e. not OBO the Foundry co-ordinators). Will discuss on PI call. The representative will need to send an email officially submitting GO for review as an OBO Foundry ontology.
- Someone:Put a link on production AmiGO to link to beta server so people we are not aware of can start looking. With blurb about what's new and request for feedback.
- Jane and Pascale to take to AmiGO group - this beta might be a bit similar to the live version - confusing?
Discussion Items
IEA annotation meeting
Emily Dimmer is very interested to hear about the plans for the electronic annotation meeting - Mike informs us that there is nothing currently in the pipeline about this
OStatic interview
Which of the PIs will pursue this interview: OStatic (http://ostatic.com)? Michael to do this by email or voice - will decide which on PI call this week.
Reference Genomes Jamboree
Electronic jamboree worked pretty well! See Electronic_jamboree_july18-2008 for minutes and action items (10 action items!!). Repeat every 3 months or so? Brings up lots of unresolved issues which can be discussed on monthly calls.
Rename GO:0005634 to 'cell nucleus'
https://sourceforge.net/tracker/index.php?func=detail&aid=2024731&group_id=36855&atid=440764. Some discussion as to the merits of changing this term name - it was decided to add 'cell nucleus' as an exact synonym but to leave the term name as is to be intuitive to biologists
Next Meeting
13th August
Agenda: Jane Minutes: Chris
Summary of action items
- Jen: Send supplementary data from Paul Dobson drug transporter review to Judy
- David and Tanya: Find different example for BP-MF links email
- Judy: Report to managers on who is invited/attending the SAB in Montreal
- GO PIs: Decide who is to be the GO representative to the OBO Foundry and have them email officially submitting GO for review
- Jane: Suggest to AmiGO developers that we add a link to AmiGO for users to beta test 1.6
- PIs/Michael: OStatic interview?