Nov2008 ontology report

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Ontology Development & GO Editorial Office Report - November 2008

I. Ontology Development

  • SourceForge
    • Items opened: 64
    • Items closed: 77
      • GO Eds: 46
      • MOD curators: 14 (details in Appendix 1)
      • GO Ed/MOD collaborations: 17 (details in Appendix 2)
    • Items still open: 253
      • assigned, GO Eds: 75
      • assigned, MOD curators: 84
      • unassigned: 94
  • Content items resolved
    • Several SourceForge items resolved

See monthly report in CVS for ontology statistics.

II. GO Editorial Office activities not represented in part I

  • Amelia at Berkeley
  • OBO-Edit working group:
    • Lots of OBO-Edit 2 testing -- list of testing tasks for 2.0 release drafted
    • Dictionary additions for OBO-Edit2 spell checking released (Jen)
    • Improved Tree Viewer released (Jen)
  • Advocacy/outreach
    • Visit from Hein van der Steen on ATO development (reported to managers; see minutes from Nov. 5 and 19
    • Discussions with Ana Barat on cancer and ontologies (Jen, Jane, plus Rachael for GOA)
    • Usual gohelp traffic
  • Publications
    • PAMGO manuscript submitted (PAMGO curators, Jane)
  • Meetings
    • Java web services course (Jen)
  • Anything else
    • Sabina Leonelli visited to interview GO editors and other curators
    • IMG mapping resumed (Jane)
    • Developing teaching materials for a Java programming course to be run at the EBI in January (Jen, with EBI programmers and training staff)
    • GO bibliography has 2296 entries
Appendix 1: MOD curators' SF items
1998775 Alex, David, Tanya
2097052 David
2100260 Tanya & David
2129906 Tanya, David, Ruth
2174782 Tanya & David
2191743 Tanya & David
2204363 David, Susan
2220109 Tanya & David
2234901 Tanya & David
2237362 Tanya & David
2314971 Tanya & David
2315019 Tanya & David
2315763 David
2339392 Tanya & David


Appendix 2: GO Ed-MOD collaboration SF items - MOD curator(s) involved
1645340 Maria
1733770 CC organization wg
1811126 Karen C, Harold, Jodi
1835495 Tanya
1929532 Tanya & David
1977434 Val
2094844 Rachael, Debby, community expert Michael Melkonian
2100763 Karen C, Rama, Val
2105604 Tanya & David
2140895 Tanya & David
2145073 Chris
2226623 Maria
2230375 Alex, Ruth
2234277 Alex
2234713 Alex, David
2255163 Alex, Tanya, David
2263304 PAMGO curators


(Note: "MOD curator" is shorthand for any non-GO-Ed curator)

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