Ontology meeting 2019-07-01

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Conference Line

See calendar for details

Agenda

Discussion topics

Moving to Protégé 5.5

Pascale:

  • TO DO: Instructions

EC links

Harold and Pascale: Are we supposed to add dashes to partial ECs? This is not what we have been doing, and links with no dashed don't work. See for example mappings in http://amigo.geneontology.org/amigo/term/GO:0070005

Taxon Constraints and Obsoletions

Jim is adding a check for obsolete terms in taxon constraints. It is important to check to see if an obsoleted term has been used in a taxon constraint. If it has, the term must be removed from the import file and we need to run docker to regenerate the taxon constraint file.

Who is this strange ontobot character?

https://github.com/geneontology/go-ontology/pull/17555

Other business

On Call