Ontology meeting 2020-03-16
- 1 Conference Line
- 2 Agenda
See calendar for details
Compound function logical definition proposal
See test branch https://github.com/geneontology/go-ontology/tree/test-receptors summarized in this document https://docs.google.com/document/d/1vER4iV7oPsJu-FHJpU1_1lNarXE6ldiE_P8dqicug1M/edit
Paper identifying missing 'is_a' relations
Some missing relations are not: is it a version problem ? or maybe they aren't using the inferred version of the ontology ?
- From managers' call: We will extract errors reported and fix them - we need to assign someone.
Non-GO editors people making PR in the ontology tracker
Isn't our policy that *only* GO editors work on the ontology ? Or do we want to allow some other users to make PRs?
- We don't want a blanket rule that no one outside of the ontology editors can make pull requests, but we need to be vigilant in monitoring the types and content of pull requests.
-> We need to decide on a practice. It would be great if more people helped, but we need a procedure to 'onboard' people correctly. (Does our current procedure address this? or do we need to add something?) -> Are only GO-editors allowed to do PRs ? how are permissions configured ?
https://github.com/geneontology/go-ontology/issues/19036 CL plans to make "Cell" only valid for metazoa. Do we need to refer to 'Cell' at all in GO?