Ontology meeting 2021-10-25

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  • Group members: Pascale, Karen, Harold, Raymond, Peter, Jim, Tanya, Kimberly, David, Chris, Paul
  • Present: Pascale, Karen, Harold, Raymond, Peter, Jim, Tanya, Kimberly, David, Chris
  • Regrets: Paul

Announcements

Agenda

Subsets workshop

Discussion:

  • Should we have parent/children terms in the subset:
    • Redundant terms: https://github.com/geneontology/go-ontology/issues/22276
    • Depends on the application; for ribbon display we want to avoid; for gene grouping this may make sense
    • We could consider 2 levels - one general level and if there are too many annotations, a second level of slim terms, as if it were chapters and subchapters

Signaling issues encountered in subset workshop

https://github.com/geneontology/go-ontology/issues/22273 Need to invite Helen and Val to a meeting to explain the proposal

Rhea boomer project

https://github.com/orgs/geneontology/projects/73 Harol working on this

New taxon constraints project project

https://github.com/orgs/geneontology/projects/71

Decision on ChEBI update?

https://github.com/geneontology/go-ontology/pull/22092 Harold and Pascale to write to Alan, Anne

Other Business

https://github.com/geneontology/go-ontology/projects/1