RG: Software: AmiGO

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Ref Genome Integration with AmiGO

Current issues

Summary

  • List should not be ordered by count [DONE]
  • Add alphabetical key to summary [DONE]
  • Clearer statistical reporting on the summary
  • Experimental only view (IDA, IMP, IGI, IEP, IPI) [UNNECESSARY NOW?]
    • Show/hide by evidence code [UNNECESSARY NOW?]

Graph

  • General slowness
  • Backup to SVG (PNG download?) [DONE]
  • Separate the three ontologies
  • Experimental only view (IDA, IMP, IGI, IEP, IPI) [UNNECESSARY NOW?]
    • Show/hide by evidence code [UNNECESSARY NOW?]

Current bugs

  • Gibberish on zoom out (eventually resolved) --Tanya [???]

Current testing site

The current site for integration can be found here