SWUG:Meeting 2008 04 16
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Meeting notes
Present:
Review of previous action items
Reports and Discussion
General
- Software QC Principles - all GO software should follow these, particularly w.r.t tests
- Regulates relations wrap-up
- Function-Process_Links
- GO meeting prep
OBO-Edit
- Personnel update
- Ontology_Quality_Control page
- Text mining plugin update
- Release plans
- Optimization progress
- Tracker summary
AmiGO
- 1.5 release wrap-up
- 1.6 plans
- cross-products in amigo
- ORB & new term submission interface
- GOOSE update
- Tracker summary
Reference Genomes
- Overview of current pipeline
- RG:_Software -- summary of RG architecture
- Graph displays in AmiGO 1.6 (Mary, Seth). See http://berkeleybop.org/alpha/amigo/amigo
Documentation & Outreach
- gohelp emails
Software Architecture, Schema and Modeling
- [Database Tracker] summary
Production and operations
- gp2protein reports update
- dumping entire fasta sets for refg pipeline / Kara
- Ontology_CVS_Directory_Layout_Overhaul
- Derived_files_in_CVS
- bulkloads and IEA load update - see tracker
- loading GO.xrf_abbs - see [tracker]
- sequence loading
- secondary IDs in sequence load
- memory issues - still present?