Taxon Constraint Check Engine

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SWUG lead: Amelia Coordinates with: JenD, EmilyD

Purpose

The taxonomic constraints maintained by the ontology and annotation groups require an engine for checking annotations for constraint violations. In addition, the constraints are useful for other purposes, e.g. building slims

Background

See: Taxon_Main_Page

Deliverables

v1

In operation at berkeley production

Output: http://www.geneontology.org/quality_control/annotation_checks/taxon_checks/

v2

Implemented in java, using OWLAPIv3

Beta version: [org.geneontology.gold.rules.AnnotationTaxonCheck