XP:biological process xp plant anatomy

From GO Public

XPs defining biological processes in terms of plant_anatomy

Example:

 [Term]
 id: GO:0048367 ! shoot development
 intersection_of: GO:0032502 ! developmental process
 intersection_of: OBO_REL:results_in_complete_development_of PO:0009006 ! shoot

See the go/scratch/xps directory

• xp obo file
• imports file - point oboedit at this
• berkeley download matrix

Methods

See XP:biological_process_xp_anatomy

Relations used

We are using a proliferating number of relations from ro_proposed. We may need more. For example:

[Term]
id: GO:0048799 ! organ maturation
intersection_of: GO:0021700 ! developmental maturation
intersection_of: OBO_REL:results_in_developmental_progression_of PO:0009008 ! organ

This is not specific enough: it doesn't state that it is the organ that is maturing

Tracker Items

• GO tracker - missing links in GO based on reasoner results (open)