2010 Bar Harbor Agenda: Difference between revisions
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* 10:30 - Noon: Suzi, outline & discuss current draft of [[http://cvsweb.geneontology.org/cgi-bin/cvsweb.cgi/go/doc/GO_2011_Specific%20Aims_v4.doc]] specific aims. | * 10:30 - Noon: Suzi, outline & discuss current draft of [[http://cvsweb.geneontology.org/cgi-bin/cvsweb.cgi/go/doc/GO_2011_Specific%20Aims_v4.doc]] specific aims. | ||
* Noon-1: Lunch | * Noon-1: Lunch | ||
* 1:00-2:30: [[Annotation Advocacy and Coordination|Annotation]] Report (Rama & Emily) | * 1:00-2:30: [[Annotation Advocacy and Coordination|Annotation]] Report (Rama & Emily)- [[File: BHB2010.pdf]] | ||
*# recent projects - notes/accomplishments | *# recent projects - notes/accomplishments | ||
*#* 'binding" group report | *#* 'binding" group report |
Revision as of 10:01, 7 September 2010
Tuesday September 7
- 10:00-10:30: Welcome; Review of schedule and agenda (Judy)
- 10:30 - Noon: Suzi, outline & discuss current draft of [[1]] specific aims.
- Noon-1: Lunch
- 1:00-2:30: Annotation Report (Rama & Emily)- File:BHB2010.pdf
- recent projects - notes/accomplishments
- 'binding" group report
- 'response to' report
- 'downstream effect' report
- Reciprocal annotations (from binding group)
- Annotating to catalytic terms with IPI (report from SGD)
- initial thoughts on grant renewal
- objectives for the next 4 & 12 months (timeline and objectives)
- Reporting standards
- recent projects - notes/accomplishments
- 2:30-3:00: break
- 3:00-4:30: Ref. Genome Report (Pascale & Kara)
- recent projects - notes/accomplishments
- PAINT (Mike L)
- Wnt (Varsha, Suzi and Mike L.)
- Loading Panther files into MODs:initial reports (Harold)
- Ref. genome project tracking (Sven & Chris)
- Panther annotation status (Mary)
- initial thoughts on grant renewal (Pascale & Kara)
- objectives for the next 4 & 12 months (timeline and objectives)
- recent projects - notes/accomplishments
- dinner on your own
Wednesday September 8
- 8:30-10:00 Ontology Development Report (David and Jane)
- 10:00-10:30 Break
- 10:30-12:00 Software and Infrastructure Report (Chris, Suzi & Mike C)
- recent projects - notes/accomplishments
- OBO-Edit update. isa-closure/MIREOT support (Amina) (5 mins)
- AmiGO labs update (Chris and Seth) (5 mins)
- Galaxy integration (Chris) (5 mins)
- objectives for the next 4 & 12 months & 5 years and renewal thoughts (timeline and objectives) (1 hr)
- recent projects - notes/accomplishments
- 12:00-1:00: Lunch (OBO-Edit Working Group Lunch Meeting)
- 1:00-3:00 Inter-Operational issues
We will take this time to discuss solutions for infrastructure and best practices where the respective project teams must connect and communicate more effectively.- Annotation group:
- Annotation & reference genome groups communication (Pascale and Rama)
- Reference genome group:
- What would be the best forum to discuss annotation and ontology issues ? wiki? SF? we've been doing a bit of both, plus email. It should be more formalized.( Pascale, Mike L)
- Ontology development:
- Ontology and annotation (Jane & Rama) : how do ontology development get communicated to the annotation group? do we need to improve communication channels?
- Software and Infrastructure:
- Delivery of GAFs to MODs (Suzi)
- Annotation group:
- 3:00 Break for a Hike
- 7:00 Dinner at HighSeas
Thursday September 9
- 8:30-10:00: Grant planning discussion
- Review of Timelines
- Refinement of aims and objectives (Judy: summary of discussions up to this point)
- Overall statement of GOC accomplishments: progress report
- Rolea and future of subcontracts to MODs supplemental grants to Princeton, ARRA funding to CL
- Literature annotation (and ontology development)
- Phylogenetic annotation (and ontology development)
- Community annotation (and ontology development)
- What new priorities, strategies, technology aspects are we proposing
- Groups we might work more closely with (and perhaps additional funding opportunities): PRO, LAMHDI, ICGC, bacterial, Reactome,...
- Expressivity of annotations: LEGO (Paul T)
- Distribution channels and user support
- 10:00-10:30 - break
- 10:30-11:30 Refinement of aims and objectives cont.
- 11:30-noon Review of action items
- noon - 1 pm Lunch
- End of Meeting