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Tuesday September 7
- 10:00-10:30: Review of schedule and agenda
- 1:30 - Noon: Suzi, outline & discuss current draft of specific aims.
- Noon-1: Lunch
- 1:00-2:30: Annotation Report (Rama & Emily)
- recent projects - notes/accomplishments
- 'binding" group report
- 'response to' report
- 'downstream effect' report
- initial thoughts on grant renewal
- objectives for the next 4 & 12 months (timeline and objectives)
- 2:30-3:00: break
- 3:00-4:30: Ref. Genome Report (Pascale & Kara)
- recent projects - notes/accomplishments
- PAINT
- Wnt (Varsha, Suzi and Mike L.)
- initial thoughts on grant renewal
- objectives for the next 4 & 12 months (timeline and objectives)
- dinner on your own
Wednesday September 8
- 8:30-10:00 Ontology Development Report (David and Jane)
- recent projects - notes/accomplishments
- Aligning GO with ChEBI (David)
- Signaling group update (Becky)
- Transcription overhaul (Karen)
- initial thoughts on grant renewal
- objectives for the next 4 & 12 months (timeline and objectives)
- 10:00-10:30 Break
- 10:30-12:00 Software and Infrastructure Report (Chris, Suzi & Mike C)
- recent projects - notes/accomplishments
- QuickTerm demo (Jane)
- OBO_Edit update (Amina)
- AmiGO labs update (Chris and Seth)
- initial thoughts on grant renewal
- objectives for the next 4 & 12 months (timeline and objectives)
- 12:00-1:00: Lunch (OBO-Edit Working Group Lunch Meeting)
- 1:00-3:00 Inter-Operational issues
We will take this time to discuss solutions for infrastructure and best practices where the respective project teams must connect and communicate more effectively.
- Annotation group:
- Annotation & reference genome groups communication (Pascale and Rama)
- Reference genome group:
- What would be the best forum to discuss annotation and ontology issues ? wiki? SF? we've been doing a bit of both, plus email. It should be more formalized.( Pascale, Mike L)
- Ontology development:
- Ontology and annotation (Jane & Rama) : how do ontology development get communicated to the annotation group? do we need to improve communication channels?
- Software and Infrastructure:
- Ref. genome project tracking (Sven & Chris)
- Delivery of GAFs to MODs (Suzi)
- 3:00 Break for a Hike
Thursday September 9
- 8:30-10:00: Grant planning discussion
- Review of Timelines
- Refinement of aims and objectives
- Literature annotation (and ontology development)
- Phylogenetic annotation (and ontology development)
- Community annotation (and ontology development)
- Distribution channels and user support
- 10:00-10:30 - break
- 10:30-noon Refinement of aims and objectives cont.
- noon - 1 pm Lunch
- End of Meeting