2010 GO camp Annotation of HTP data: Difference between revisions
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=4. Examples (papers) and discussion of GO annotation issues = | =4. Examples (papers) and discussion of GO annotation issues = | ||
Hazbun TR, et al. (2003) Assigning function to yeast proteins by integration of technologies. Mol Cell 12(6):1353-65 PMID:14690591 | *Hazbun TR, et al. (2003) Assigning function to yeast proteins by integration of technologies. Mol Cell 12(6):1353-65 PMID:14690591 | ||
Kumar A, et al. (2002) Subcellular localization of the yeast proteome. Genes Dev 16(6):707-19, PMID 11914276 | *Kumar A, et al. (2002) Subcellular localization of the yeast proteome. Genes Dev 16(6):707-19, PMID 11914276 | ||
Reinders J, et al. (2006) Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics. J Proteome Res 5(7):1543-54, PMID 16823961 | *Reinders J, et al. (2006) Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics. J Proteome Res 5(7):1543-54, PMID 16823961 | ||
Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91, PMID 14562095 | *Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91, PMID 14562095 | ||
Sickmann A, et al. (2003) The proteome of Saccharomyces cerevisiae mitochondria. Proc Natl Acad Sci U S A 100(23):13207-12, PMID 14576278 | *Sickmann A, et al. (2003) The proteome of Saccharomyces cerevisiae mitochondria. Proc Natl Acad Sci U S A 100(23):13207-12, PMID 14576278 | ||
=5. Suggestions for Quality Control procedures= | =5. Suggestions for Quality Control procedures= | ||
Revision as of 13:08, 20 April 2010
Members of this working group
1. Background
2. Review of current GO annotation practices
- ChIP data (Rachael?): Annotation_consistency_:_ChIP_experiments
- SGD's HTP annotation practice
3. Proposed annotation policy
4. Examples (papers) and discussion of GO annotation issues
- Hazbun TR, et al. (2003) Assigning function to yeast proteins by integration of technologies. Mol Cell 12(6):1353-65 PMID:14690591
- Kumar A, et al. (2002) Subcellular localization of the yeast proteome. Genes Dev 16(6):707-19, PMID 11914276
- Reinders J, et al. (2006) Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics. J Proteome Res 5(7):1543-54, PMID 16823961
- Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91, PMID 14562095
- Sickmann A, et al. (2003) The proteome of Saccharomyces cerevisiae mitochondria. Proc Natl Acad Sci U S A 100(23):13207-12, PMID 14576278
5. Suggestions for Quality Control procedures
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