2011 Timeline (Archived): Difference between revisions
Jump to navigation
Jump to search
No edit summary |
mNo edit summary |
||
(58 intermediate revisions by 6 users not shown) | |||
Line 1: | Line 1: | ||
[[2010_Timeline]] | [[Category:Archived]] | ||
*[[2010_Timeline]] | |||
*[[2012_Timeline]] | |||
<br> | <br> | ||
Line 18: | Line 20: | ||
!December | !December | ||
|- | |- | ||
|[[Chemical terms in GO]] | |[[Chemical terms in GO]]. Phase I: metabolism, binding, transport | ||
|Harold, David, Tanya, Jane, Chris | |Harold, David, Tanya, Jane, Chris | ||
| | | | ||
| | | | ||
|All GOCHE terms in CHEBI <font color ="red">(DONE) | |||
| | |||
| | |||
| | |||
| | |||
| | |||
| | |||
|GOCHE checked and correct <font color ="red">(DONE) | |||
|Meet with CHEBI in London - submit paper | |||
| | |||
|- | |||
|[[Chemical terms in GO]]. Phase II: improve enzyme functions, align with external databases inc. Rhea, MF-BP links for enzymes/metabolic processes | |||
|Amelia, Chris, David, Jane, Tanya, Becky, Paola | |||
| | |||
| | |||
| | |||
| | | | ||
| | | | ||
Line 33: | Line 50: | ||
| | | | ||
|- | |- | ||
| | |Cell ontology cross-products | ||
| | |Paola, Chris, Jane, Alex | ||
| | | | ||
| | |||
| | |||
| | |||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
|- | |- | ||
|[[ | |[[Cross_Product_Guide|Internal Cross Products]] | ||
| | |David, Tanya, Jane, Chris, Paola, Becky | ||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
|BPxCC occurs_in only <font color ="red">(DONE) | |||
| | | | ||
| | | | ||
Line 62: | Line 78: | ||
| | | | ||
| | | | ||
|MFxCC? | |||
|- | |- | ||
|[[Signaling |Signaling overhaul]] | |[[Signaling |Signaling overhaul]] | ||
Line 67: | Line 84: | ||
|define FUNCTION signaling molecule terms | |define FUNCTION signaling molecule terms | ||
| | | | ||
|Redefine receptor terms and standardise parentage/children | |Redefine receptor terms and standardise parentage/children <font color ="red">(DONE) | ||
| | | | ||
| | | | ||
Line 76: | Line 91: | ||
| | | | ||
| | | | ||
|Adding ligand binding HAS_PART relationships to receptors | |||
|Cleaning up receptors that aren't functions | |||
| | | | ||
|- | |- | ||
| | |[[Kidney Development]] | ||
| | |David, Doug, Becky, Yasmin and community experts | ||
| | | | ||
| | | | ||
Line 91: | Line 107: | ||
| | | | ||
| | | | ||
|Paper submitted <font color ="red">(DONE) | |||
| | | | ||
|- | |- | ||
| | |Protein complexes in GO | ||
| | |Harold | ||
| | | | ||
| | | | ||
| | | | ||
Line 108: | Line 125: | ||
| | | | ||
|- | |- | ||
| | |[[Neurobiology Project|Neurological processes and components]] | ||
| | |Jane, Chris, David and Paola | ||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
| | |||
| | |||
|Added/rearranged some synapse-related GO terms | |||
| | | | ||
| | | | ||
Line 119: | Line 139: | ||
| | | | ||
| | | | ||
|- | |||
|[[Transcription]] overhaul | |||
|David, Karen | |||
|Term Additions <font color ="red">(DONE) | |||
| | | | ||
| | | | ||
|Term Obsoletions <font color ="red">(DONE) | |||
| | |||
| | |||
|<font color ="red">(DONE). <font color ="black">Some ongoing improvments | |||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
|- | |||
|Cardiac Conduction Ontology Development | |||
|Ruth, Stan, Doug, David, Tanya, Becky, Paola and community experts | |||
| | | | ||
| | | | ||
Line 137: | Line 164: | ||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
|Content meeting at UCL | |||
| | | | ||
|- | |||
|Apoptosis | |||
|Emily, Becky, Paola, Pablo and community experts | |||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
|Interest meeting with experts @ EBI | |||
| | | | ||
| | | | ||
| | | | ||
|Collect feedback from experts at APO-SYS meeting | |||
|Revisiting caspase-related terms (phase I) <font color ="red">(DONE) | |||
|Revisiting top-level terms and existing annotations <font color ="red">(IN PROGRESS) | |||
|Revisiting caspase-related terms (phase II) and existing annotations | |||
|- | |- | ||
| | |[[Virus_terms|Viral processes]] | ||
| | |Jane, Philippe Le Mercier (SIB) and community experts | ||
| | | | ||
| | | | ||
| | | | ||
Line 166: | Line 198: | ||
| | | | ||
| | | | ||
| | |Terms integrated in to live GO |
Latest revision as of 10:50, 10 February 2023
Project | Personel | January | February | March | April | May | June | July | August | September | October | November | December |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Chemical terms in GO. Phase I: metabolism, binding, transport | Harold, David, Tanya, Jane, Chris | All GOCHE terms in CHEBI (DONE) | GOCHE checked and correct (DONE) | Meet with CHEBI in London - submit paper | |||||||||
Chemical terms in GO. Phase II: improve enzyme functions, align with external databases inc. Rhea, MF-BP links for enzymes/metabolic processes | Amelia, Chris, David, Jane, Tanya, Becky, Paola | ||||||||||||
Cell ontology cross-products | Paola, Chris, Jane, Alex | ||||||||||||
Internal Cross Products | David, Tanya, Jane, Chris, Paola, Becky | BPxCC occurs_in only (DONE) | MFxCC? | ||||||||||
Signaling overhaul | Jen, Becky, Alex, Sandra, Peter, Ruth and others | define FUNCTION signaling molecule terms | Redefine receptor terms and standardise parentage/children (DONE) | Adding ligand binding HAS_PART relationships to receptors | Cleaning up receptors that aren't functions | ||||||||
Kidney Development | David, Doug, Becky, Yasmin and community experts | Paper submitted (DONE) | |||||||||||
Protein complexes in GO | Harold | ||||||||||||
Neurological processes and components | Jane, Chris, David and Paola | Added/rearranged some synapse-related GO terms | |||||||||||
Transcription overhaul | David, Karen | Term Additions (DONE) | Term Obsoletions (DONE) | (DONE). Some ongoing improvments | |||||||||
Cardiac Conduction Ontology Development | Ruth, Stan, Doug, David, Tanya, Becky, Paola and community experts | Content meeting at UCL | |||||||||||
Apoptosis | Emily, Becky, Paola, Pablo and community experts | Interest meeting with experts @ EBI | Collect feedback from experts at APO-SYS meeting | Revisiting caspase-related terms (phase I) (DONE) | Revisiting top-level terms and existing annotations (IN PROGRESS) | Revisiting caspase-related terms (phase II) and existing annotations | |||||||
Viral processes | Jane, Philippe Le Mercier (SIB) and community experts | Terms integrated in to live GO |