2013 Bar Harbor GOC Meeting Agenda: Difference between revisions
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===Thurs 3 Oct (Pre-Meeting Working Groups)=== | ===Thurs 3 Oct (Pre-Meeting Working Groups)=== | ||
Some of these groups might instead be 'breakout' groups during the formal meeting. | Some of these groups might instead be 'breakout' groups during the formal meeting. | ||
* 1:00 - 2:00 pm Annotation extensions: for those already making c16 annotations and ontology developers; This group will be finalizing what they want to present to the whole GOC during this meeting | * 1:00 - 2:00 pm '''Annotation extensions''': for those already making c16 annotations and ontology developers; This group will be finalizing what they want to present to the whole GOC during this meeting | ||
* 2:00 - 2:30 pm CAT working group: next steps moving from Protein2GO to free-standing CAT (independent of UniProt) | * 2:00 - 2:30 pm '''CAT working group''': next steps moving from Protein2GO to free-standing CAT (independent of UniProt) | ||
* 2:30 - 3:30 pm Web documentation, Drupal transition | * 2:30 - 3:30 pm '''Web documentation, Drupal transition''' | ||
* 3:30 - 4:30 pm Ontology group discussion: OWL/OBO editing workflow | * 3:30 - 4:30 pm '''Ontology group discussion''': OWL/OBO editing workflow | ||
* 4:30 - 5:30 pm PAINT group discussion: This is a working group meeting for those PAINT curators and developers in town on Thur. | * 4:30 - 5:30 pm '''PAINT''' group discussion: This is a working group meeting for those PAINT curators and developers in town on Thur. | ||
* 7 pm: LEGO group discussion | * 7 pm: '''LEGO''' group discussion | ||
===Friday 4 Oct (Annotation)=== | ===Friday 4 Oct (Annotation)=== |
Revision as of 11:18, 18 September 2013
Thurs 3 Oct (Pre-Meeting Working Groups)
Some of these groups might instead be 'breakout' groups during the formal meeting.
- 1:00 - 2:00 pm Annotation extensions: for those already making c16 annotations and ontology developers; This group will be finalizing what they want to present to the whole GOC during this meeting
- 2:00 - 2:30 pm CAT working group: next steps moving from Protein2GO to free-standing CAT (independent of UniProt)
- 2:30 - 3:30 pm Web documentation, Drupal transition
- 3:30 - 4:30 pm Ontology group discussion: OWL/OBO editing workflow
- 4:30 - 5:30 pm PAINT group discussion: This is a working group meeting for those PAINT curators and developers in town on Thur.
- 7 pm: LEGO group discussion
Friday 4 Oct (Annotation)
- Annotation Production (Mike)
- Quality control reports and how to manage them efficiently
- With/From column IDs (what is mandatory, how to move this to Jenkins for checking)
- Discussion of the best way to incorporate external annotations into the resource.
- Discuss which evidence codes to use for annotation predictions.
- Discuss strategies for incorporation
- Reactome annotations, their use of ev.codes etc
- Proposal to integrate protein binding annotations
- Quality control reports and how to manage them efficiently
- PAINT annotation update (Paul T)
- PAINT tool update (Suzi)
- Common Annotation Tool update (Paul S)
- Tutorial on column 16 (Rachael)
Conference Dinner at 5:30 pm Cafe This Way
Saturday 5 Oct (Tools and Ontology)
- Ontology Development/ Biological Modeling (Judy)
- TermGenie Updates (Jane)
- Update on Cross products- internal and external ontologies (David)
- Transition to OWL update (Chris)
- Reactome Discussion
- Align ontology with Reactome's definitions of pathways (David et al). Work is similar to Chebi project.
- Molecular Function alignment with Rhea
- AmiGO
- Goose
Field Trips:Enjoy Acadia National Park. 4:00pm
Sunday 6 Oct (Usability)
- Biological Usability
- Gold Standard Annotation Sets (Rama)
- LEGO and pathways (Paul T)
- Future Meetings
- GOC meeting next Spring (Jim Hu)
- Possibility of an Annotation Camp in the near future (discuss dates/venue)