2013 Bar Harbor GOC Meeting Agenda: Difference between revisions

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# Web documentation, Drupal transition
# Web documentation, Drupal transition
# Ontology group discussion: OWL/OBO editing workflow
# Ontology group discussion: OWL/OBO editing workflow
# PAINT group discussion: This is a working group meeting for those PAINT curators and develops in town on Thur.
# PAINT group discussion: This is a working group meeting for those PAINT curators and developers in town on Thur.
# LEGO group discussion
# LEGO group discussion



Revision as of 11:31, 17 September 2013

Pre-Meeting (o Breakouts during Meeting)

Thurs 3 Oct

  1. Annotation extensions: for those already making c16 annotations and ontology developers; This group will be finalizing what they want to present to the whole GOC during this meeting
  2. Web documentation, Drupal transition
  3. Ontology group discussion: OWL/OBO editing workflow
  4. PAINT group discussion: This is a working group meeting for those PAINT curators and developers in town on Thur.
  5. LEGO group discussion

Friday 4 Oct (Annotation)

  1. Annotation Production
    1. Quality control reports and how to manage them efficiently
      1. With/From column IDs (what is mandatory, how to move this to Jenkins for checking)
    2. Discussion of the best way to incorporate external annotations into the resource.
      1. Discuss which evidence codes to use for annotation predictions.
      2. Discuss strategies for incorporation
    3. Reactome annotations, their use of ev.codes etc
    4. Proposal to integrate protein binding annotations
  2. Phylogenetic propagation of annotations
    1. PAINT annotation update

Saturday 5 Oct (Tools and Ontology)

  1. Annotation tools and Resources
    1. PAINT tool update
    2. Common Annotation Tool
    3. TermGenie Updates
    4. LEGO
    5. Update on column 16
      1. Tutorial on Col-16
  2. Ontology Development/ Biological Modeling
    1. Update on Cross products- internal and external ontologies
    2. Transition to OWL update
    3. Reactome Discussion
      1. Align ontology with Reactome's definitions of pathways (David et al). Work is similar to Chebi project.
    4. Molecular Function alignment with Rhea

Sunday 6 Oct (Usability)

  1. Biological Usability
    1. AMIGO
    2. Goose and other tools
    3. QuickGO
    4. GOHelp
  2. Future Meetings
    1. GOC meeting next Spring
    2. Possibility of an Annotation Camp in the near future (discuss dates/venue)