Difference between revisions of "2013 Cambridge GOC Meeting Agenda"

From GO Wiki
Jump to: navigation, search
(1. Annotation Extension)
(1. Annotation Extension)
Line 47: Line 47:
 
* Transferring annotation extensions by sequence similarity (Rachael)
 
* Transferring annotation extensions by sequence similarity (Rachael)
  
  '''Interested in attending:''' Jane, Rachael, Susan, Petra
+
  '''Interested in attending:''' Jane, Rachael, Susan, Petra, Mary
  
 
== 2. PAINT Meeting - Huaiyu ==
 
== 2. PAINT Meeting - Huaiyu ==

Revision as of 05:29, 28 March 2013

The 2013 GO Consortium meeting will be held 11-13 April, in Cambridge, UK, immediately following Biocuration 2013.

Agenda for Thursday

  • 8:30AM MeetUp
  • 9:00AM Start
  • 10:30AM break
  • 12:30PM lunch
  • 3:30PM afternoon break

Usability

GOAL:Provide community with ability to obtain and use GO resources

  • Update on Galaxy (Chris)
  • New Web Site http://beta.geneontology.org - drupal (Seth)
  • AmiGO 2.0 (Seth)
  • Platinum standard data sets for enrichment analyses (Paul S, Rama)

Biological Knowledge

  • Responsiveness of ontology changes to annotation needs
    • Current mechanisms: tracker, TG, Jira (Jane)
    • TermGenie freeform demo (Jane)
  • Transition to OWL progress and status (Chris)
    • Leverage of external ontologies
  • Annotation expressivity
    • LEGO
      • Implementation plan (Chris)
    • Annotation extensions (Rachael)
      • Annotation relations
    • GPAD status (Chris)
  • ChEBI status (David)
  • Cell cycle report (Val)

Comparative and Phylogenetic Annotations

  • PAINT progress, including overview of SOPs (Huaiyu)
  • Jenkins for QC (Heiko)
  • New rules for ISO mouse/human/rat when M:N gene sets (Judy)

Literature Annotation

  • apoptosis (re)annotation effort (Paola)
  • production statistic reports (Paul S)

Friday afternoon breakout sessions

1. Annotation Extension

Interested in attending: Jane, Rachael, Susan, Petra, Mary

2. PAINT Meeting - Huaiyu

  • including ontology developers
  • Look at annotation consistency
Interested in attending: Jane, Susan

3. Cell cycle

  • WG to work through outstanding issues
Interested in attending: Jane, Rachael, Susan

Action Item Review and Reports

Caltech meeting minutes meeting minutes as a Google Doc

See also