2013 Cambridge GOC Meeting Agenda

The 2013 GO Consortium meeting will be held 11-13 April, in Cambridge, UK, immediately following Biocuration 2013.

Agenda for Thursday

• 8:30AM MeetUp
• 9:00AM Start
• 10:30AM break
• 12:30PM lunch
• 3:30PM afternoon break

Usability

• Update on Galaxy
• New Web Site http://beta.geneontology.org - drupal
• Platinum standard data sets for enrichment analyses
• GOMine

Biological Knowledge

• Transition to OWL progress and status
  • Leverage of external ontologies
• Annotation expressivity
  • LEGO
    • Implementation plan (Chris)
  • Annotation extensions
    • Cell types and anatomical structures
    • Targets
  • GPAD status
• ChEBI status (submitted?)
• Responsiveness of ontology changes to annotation needs
  • Current mechanisms: tracker, TG, Jira
  • TermGenie freeform demo
• Cell cycle report

Comparative and Phylogenetic Annotations

• PAINT progress
• New rules for ISO mouse/human/rat when M:N gene sets
• Jenkins for QC

Literature Annotation

• apoptosis (re)annotation effort
• submissions from outside groups
• production statistic reports

Friday afternoon breakout sessions

1. Annotation Extension

• New property_values replacing domain/range
• Subsets of relations to enable easy use by curators (http://wiki.geneontology.org/index.php/Ontology_meeting_2013-03-21#Annotation_relations)
• Transferring annotation extensions by sequence similarity

2. Other suggestions?

• Annotation Consistency

Action Item Review and Reports

Caltech meeting minutes meeting minutes as a Google Doc

See also

• 2013 Cambridge Logistics
• 2013 Cambridge GOC Scientific Advisory Board Meeting Agenda