2013 Cambridge GOC Meeting Agenda
The 2013 GO Consortium meeting will be held 11-13 April, in Cambridge, UK, immediately following Biocuration 2013.
Agenda for Thursday
- 8:30AM MeetUp
- 9:00AM Start
- 10:30AM break
- 12:30PM lunch
- 3:30PM afternoon break
Usability
GOAL:Provide community with ability to obtain and use GO resources
- Update on Galaxy (Chris)
- New Web Site http://beta.geneontology.org - drupal (Seth)
- AmiGO 2.0 (Seth)
- Platinum standard data sets for enrichment analyses (Paul S, Rama)
Biological Knowledge
- Interaction between ontology development and annotation
- Current mechanisms: tracker, TG, Jira (Jane)
- Update on existing TG templates, tree browser esp CHEBI, numbers of terms added (Jane)
- TermGenie freeform demo (Jane)
- Cross-product status, inc cell type (David)
- Cell cycle report (Val)
- Transition to OWL progress and status (Chris)
- Annotation expressivity
Comparative and Phylogenetic Annotations
- PAINT progress, including overview of SOPs (Huaiyu)
- Jenkins for QC (Heiko)
- New rules for ISO mouse/human/rat when M:N gene sets (Judy)
Literature Annotation
- apoptosis (re)annotation effort (Paola)
- production statistic reports (Paul S)
Friday afternoon breakout sessions
1. Annotation Extension
- New property_values replacing domain/range (Chris and Tony)
- Subsets of relations to enable easy use by curators (http://wiki.geneontology.org/index.php/Ontology_meeting_2013-03-21#Annotation_relations) (Jane and Rachael)
- Transferring annotation extensions by sequence similarity (Rachael)
Interested in attending: Jane, Rachael, Susan, Petra, Mary, David, Midori, Chris, Kimberly, Ruth, Donghui, Tanya, Val
2. PAINT Meeting - Huaiyu
- including ontology developers
- Look at annotation consistency
Interested in attending: Jane, Susan, Ruth, Donghui,Val
3. Cell cycle
- WG to work through outstanding issues
Interested in attending: Jane, Rachael, Susan, David, Tanya, Val, Paola
Action Item Review and Reports
Caltech meeting minutes meeting minutes as a Google Doc
See also