2013 Cambridge GOC Scientific Advisory Board Meeting Agenda

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Agenda

  • The morning session will include reports from GO Directors.
  • GOC community is encouraged to attend the morning session.
  • SAB will have private catered lunch at 12:30 in the main meeting room.
  • Afternoon session will include SAB and GOC Directors and sub-contract PIs

April 12, 2013, Morning SAB Meeting (Open)

8:30AM Introductions and Overview of GOC

9:00AM - Community Utility

  • GO Galaxy
  • New website prototype
  • AmiGO 2
  • GO Mine
  • Summary: Key Accomplishments & timeline for next steps

10:00am - Annotation

  • Annotation stats (Paul S)
  • Example of Community Curation from S. Pombe (Val)
  • protein2GO transition (Kimberley)
  • Phylogenetic based - PAINT
  • Summary: Key Accomplishments & timeline for next steps

11:00 - break

11:30 Ontology domain & modeling extensions

  • Domain specific development
    • Apoptosis
    • Cell cycle
  • Modeling enhancements
    • Transition to OWL
    • Logical definitions (Term Genie)
    • LEGO
  • Summary: Key Accomplishments & timeline for next steps

12:30PM -- Private lunch for SAB

  1. How much effort should we devote to engaging user community about GO resources and how to most effectively use them?
  2. What is appropriate balance between curation of experimental annotations (mostly in MODs) with increased context of specific protein, specific cell type, specific time, and the curation of inferenction annotations for all life forms via phylogenetic/comparative approaches?
  3. What GOC tasks have greatest impact on scientific usability?
  4. Is balance of effort between ontology development and knowledge curation and usability appropriate?

1:30PM Discussion: SAB, PIs

4:00PM Summary, Wrap-UP