2014 College Station GOC Meeting Agenda

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Pre-Meeting Working Groups

Saturday 15 March

Jim will direct pre-meeting working group(s?) to empty classrooms to meet.

  • 9:00am - 05:00pm Molecular Modeling Framework (Paul T, Paul S, Suzi, Kimberly, Jane, Chris, Heiko, Seth, Rachael, Huaiyu, Tony, David H, David O-S, Tanya)
    1. Framework - We'll draw up some pictures of the different pieces and how they fit together to get everyone on the same page. We'll discuss where questions still remain.
    2. LEGO/MOMO UI - We are now at the stage where we have a working annotation UI available for initial feedback. It connects to the existing LEGO data (stored at present in files under SVN) and thus provides a realistic tool for evaluation. We can also extends these by seeding them with existing GO annotations if a curator wants to work on a particular module. After such seeding a curator can review what's already been annotated and incorporate it into the module.
    3. Ontology - Sort out how to do multi-species annotation and the overall OWL modeling
    4. Integration - We currently have several useful annotation tools for different pieces, but would like to make this more seamless for curators. What code can we share? What signals can we pass?
    5. Roadmap - Milestones and 6-month to year plan for bringing this into eventual production. We can revisit the framework from the morning and revise it based on the day's discussion (for showing at the big meeting the next day).

Minutes

  • (Add link here)

Progress Reports

  • Progress reports by Aim
    1. Literature Annotation
    2. PAINT Annotation
    3. Common Annotation Framework
    4. Ontologies
    5. Delivery of Annotation and Ontologies to the Community
  • Response to SAB
    1. SAB report from Cambridge April 2013 ( [1])
    2. Our reponse...
  • Questions for SAB

Agenda

  1. Assign 'official' note takers, set up Google doc for notes and so everyone can augment, introductions of new people

Sunday 16 March

Breakfast on your own

START 8:30

BREAK: 10:30 - 11:00

LUNCH: 12:30 - 2:00 pm

BREAK: 3:30 -3:45 pm

5:30 Group Photo

Conference Dinner

Monday 17 March

Breakfast on your own

START 8:30

BREAK 10:30-11:00 am

LUNCH 12:30 - 1:30pm

BREAK 3:30 - 4:00 pm

SAB Dinner

Tuesday 18 March

START 8:30

  • Presentations to SAB (~3 hours)

LUNCH 11:30 - 1:30pm

  • SAB discussions privately

START 1:30

  • SAB reports to PIs

3:30 pm End of meeting