2015 Washington DC GOC Symposium Agenda: Difference between revisions

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Date:  September 1, 2015
Date:  September 1, 2015  
 
Location:  at the [http://virtualtour.gwu.edu/#UMAP_2013090592962%7CBLD_2013101747929%7B%22mediaArea%22:%22Photos%22%7D Marvin Conference Center, George Washington University], at the heart of Washington, DC. The Marvin Conference Center is located at [https://www.google.com/maps/place/The+Marvin+Center/@38.899938,-77.047167,17z/data=!3m1!4b1!4m2!3m1!1s0x89b7b7b0f084314b:0x90983f7d137cf222 800 21st St NW Washington, DC 20052].  
Location:  at the [http://virtualtour.gwu.edu/#UMAP_2013090592962%7CBLD_2013101747929%7B%22mediaArea%22:%22Photos%22%7D Marvin Conference Center, George Washington University], at the heart of Washington, DC. The Marvin Conference Center is located at [https://www.google.com/maps/place/The+Marvin+Center/@38.899938,-77.047167,17z/data=!3m1!4b1!4m2!3m1!1s0x89b7b7b0f084314b:0x90983f7d137cf222 800 21st St NW Washington, DC 20052].  


Please [https://www.regonline.com/gene-ontology2015 Register Here] (no fee ) so we can plan breakout and lunch offerings.
Please [https://www.regonline.com/gene-ontology2015 Register Here] so we can plan breakout and lunch offerings.
No fee.
All welcome.
All welcome.



Revision as of 16:26, 20 August 2015

Date: September 1, 2015

Location: at the Marvin Conference Center, George Washington University, at the heart of Washington, DC. The Marvin Conference Center is located at 800 21st St NW Washington, DC 20052.

Please Register Here so we can plan breakout and lunch offerings. No fee. All welcome.

Morning Session

  • 9:00 - 9:30 Welcoming remarks & overview of today's agenda.
  • 9:30 - 11:00 Workshop #1: Annotation (Rama, Pascale, David OS, Chris, Rachael, Ruth)
- Annotating new genomes and new biology - (microRNA, Rachael)
- Focus annotation (Cardiovascular and Telomeres - Ruth, synapse - David OS)
- Noctua - Chris
- Annotating contextual information - (Annotation extensions - Rachael)


  • 11:00 - 11:20 Coffee break

Functional Context Matters: Building and Applying a New Dictionary for Human Development

"With the recent proliferation of genomic data sets, opportunities for computational scientists to make fundamental contributions to medical research have grown phenomenally. Dr Slonim's group is focused on developing novel computational methods to advance medical research in two primary areas: determining key regulatory processes governing normal human fetal development, and predicting or interpreting interactions between sets of proteins in a context-dependent fashion"

Lunch Break

  • 11:50 am - 12:40 pm


Afternoon Session

Dr. Ideker is Professor of Medicine at UCSD. He is the Director of the San Diego Center for Systems Biology and the Director of the National Resource for Network Biology. He is a pioneer in using genome-scale measurements to construct network models of cellular processes and disease.

  • 1:10 - 2:40 Workshop #2: Enrichment Analysis using the GO.
- Statistical options and parameters ( Judy )
1. Underlying strategy and parameters
2. Use VLAD and GeneWeaver tools to demonstrate broad enrichment analysis options and capabilities
- Defining data sets for GO enrichment analysis (Paul)
1. Development of Panther and GO data sets for enrichment analysis
2. Current implementation through AmiGO
3. Most common go-help issues and solutions
4. Next steps and future plans
- GO tools, website, training, outreach, Helpdesk, and TermGenie (Heiko, Moni, Seth)
  • 2:40 - 3:00 Coffee Break
  • 3:00 - 3:40 Open discussion: Q&A and concluding remarks.