2017 November Berkeley GO Developers Meeting

Agenda

zoom links will be added for open sessions

mon

Seth/Tremayne

am

rm 258 (Seth)

• 10.30am Tremayne welcome
• 11.00am bbop group meeting
• 11.30am lunch

pm

rm 257

• 1-1.30pm OPEN SESSION Noctua and GOCAMs (Chris)
• 1.30-2pm OPEN SESSION The noctua workbench system (Seth)
• 2-5pm: Noctua workbench hacking (Seth/Tremayne/Eric)

tue

am

rm 258 (Seth)

• 9.30am-11.30am Noctua workbench hacking
• 11.30am lunch

pm

rm 257

• 1pm-2pm OPEN SESSION Intro to SPARQL (Eric)
• 2pm-3pm GO pipeline (Eric, Seth)
• 3pm-5pm hacking

evening

Nathan and Deepak arrive

wed

Nathan and Deepak arrive

Apollo breakout, rm 248

9.30am-11.30 deepak/nathan/suzi/EricY hacking

Noctua breakout, rm 258

9.30am-11.30 Seth/Tremayne/Eric hacking

11.30am lunch

1pm-5pm

deepak hanging out with group noctua hacking

thu

9.30am-11.30am

• deepak hacking with Eric D on ontobio
• tremayne hacking with anushya? rm248

11.30am lunch

pm

rm248

• 12-1 monarch group meeting

General session - all bbop group members should attend

may also invite Andrew, Marcin

• 2pm-4pm BBOP APIs and data models: Chris, Seth
• 4pm-5pm API discussion

evening

group dinner TBD

fri

open ended

am

rm 153

• Anushya and Tremayne meeting

pm

rm 248

Accommodations

You can get the lab rate and any of these hotels:

• http://travel.lbl.gov/air_car_hotel/preferred_hotels.html
• Closest hotel: http://www.fourpointssanfranciscobaybridge.com/ -- However, it is still 30 mins walk away
• The most pleasant option is to stay in downtown berkeley and get the lab shuttle in the morning. Others may be staying here: http://www.senshotelberkeley.com
• Non-lab employees may want to look on airbnb

Parking

Park temporarily and grab a parking pass from the person at the gate, you can then park in the garage:

• http://biosciopsatberkeley.lbl.gov/location/aquatic-park-office/

Meeting Location

Berkeley Lab, Aquatic Park Offices

Lawrence Berkeley National Laboratory (LBNL), Aquatic Park office of Biosciences Operations at Berkeley Physical address: 717 Potter Street, Berkeley, CA 94710

Meeting room: room 181

Travel between hotel and meeting

• Walk, 1.3 miles
• Free Hollis Shuttle
• Taxi/Lyft/Uber

Aim to be at the lab for 9.30am

Participants

USC:

• Tremayne Mushayahama
• Anushya?

LBL:

• Chris Mungall
• Eric Douglass
• Seth Carbon
• HyeongSik Kim
• Suzi Lewis