2018 NYU SAB Meeting Agenda

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date: July 15, 2018

TO DO

  • Go over last SAB report, make sure we've addressed everything


  • What materials do we need to prepare in advance ?
    • Update on priorities/progress
    • Metrics of our accomplishments
  • Are there any specific questions we have for the SAB?


What we'd like to show

  • Noctua 1.0: demo, show groups using it

Important points from the 2015 SAB report

  • Organization of the GOC
    • Goals
    • GOC projects and resources
    • QA group
  • Tools:
    • PAINT
    • Noctua
    • Capella: paper viewer tool
  • Broader community initiatives
    • Developer community: R packages for GO (technical outreach)
    • Draft some best practices for the developer community
    • Suggestion to have a “Certified GO tool developer” program with badges (not implement but what do people think ? can we also do that for curators?
    • Can GO partner with other enrichment tools beyond panther?
    • Make GO data available via web services to help people keep their data up to date (ongoing)
    • What is the future of https://github.com/cmungall/term-enrichment-protocol for standardizing among various enrichment tools? (not updated since 2014)
    • Provide geneontology.org progress/usage metrics, particularly usage of enrichment analysis and compare to DAVID stats - see 2017 progress report
  • Outreach group

Questions we'd like to ask

  • Should we push out GO-CAMs into pathway databases like pathwaycommons, ndex, ...?