2018 USC Noctua developers meeting I: Difference between revisions
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== Venue == | == Venue == | ||
* USC Health Sciences Campus | |||
* Room NRT 2508 (Norris Research Tower, enter the Norris Comprehensive Cancer Center, take elevator in north corner of lobby) | |||
** In NCCC lobby, if entering from quad turn left after small waiting area, then right (elevator is near piano) | |||
** Campus Map: http://web-app.usc.edu/maps/#hsc (search for NRT) | |||
* Dinner on Wednesday, 6pm at Cafe Santorini in Pasadena http://cafesantorini.com | |||
== Hotel == | == Hotel == | ||
Line 7: | Line 11: | ||
== Agenda == | == Agenda == | ||
See also google doc: https://docs.google.com/document/d/1u3UZs8zrjTWwpca3rgpaqhlo7V7iLnT8JIMNV1ZUM2M/edit | |||
=== Wednesday === | |||
* GO Objectives (Chris, Paul) | |||
** GO-CAM rollout (MODs, SIB, ...) | |||
** Unifying architecture | |||
==== Software Overviews ==== | |||
Everyone gives an update on a piece of software they are working on. A quick demo if appropriate. Status on open tickets. Also | |||
* what are some things blocking you? | |||
* where next? | |||
* Noctua (Seth) | |||
* SAE (Tremayne) | |||
* Reactome2GO (Ben) | |||
* Ontobio and Biolink (Chris) | |||
* Merging GAFs into GO-CAMs (Dustin) | |||
* Pipeline (Seth and Eric) | |||
* rdf.geneontology.org (Eric and Chris) | |||
* Enrichment API (Tremaybe/Anushya) | |||
==== Hacking ==== | |||
== Parking Lot == | |||
*Reactome2GO | *Reactome2GO | ||
Line 15: | Line 47: | ||
*Python code/biolink | *Python code/biolink | ||
*Web APIs | *Web APIs | ||
*Release of PAINT annotations | |||
*Release of SynGO annotations | |||
== Participants == | == Participants == | ||
Line 29: | Line 63: | ||
USC | USC | ||
*Anushya Muruganujan | |||
*Tremayne Mushayahama | *Tremayne Mushayahama | ||
*Dustin Ebert | *Dustin Ebert |
Latest revision as of 17:26, 24 August 2018
Venue
- USC Health Sciences Campus
- Room NRT 2508 (Norris Research Tower, enter the Norris Comprehensive Cancer Center, take elevator in north corner of lobby)
- In NCCC lobby, if entering from quad turn left after small waiting area, then right (elevator is near piano)
- Campus Map: http://web-app.usc.edu/maps/#hsc (search for NRT)
- Dinner on Wednesday, 6pm at Cafe Santorini in Pasadena http://cafesantorini.com
Hotel
Agenda
See also google doc: https://docs.google.com/document/d/1u3UZs8zrjTWwpca3rgpaqhlo7V7iLnT8JIMNV1ZUM2M/edit
Wednesday
- GO Objectives (Chris, Paul)
- GO-CAM rollout (MODs, SIB, ...)
- Unifying architecture
Software Overviews
Everyone gives an update on a piece of software they are working on. A quick demo if appropriate. Status on open tickets. Also
- what are some things blocking you?
- where next?
- Noctua (Seth)
- SAE (Tremayne)
- Reactome2GO (Ben)
- Ontobio and Biolink (Chris)
- Merging GAFs into GO-CAMs (Dustin)
- Pipeline (Seth and Eric)
- rdf.geneontology.org (Eric and Chris)
- Enrichment API (Tremaybe/Anushya)
Hacking
Parking Lot
- Reactome2GO
- Noctua unit tests
- Ensuring some test models are always available on dev
- UI architecture: Angular, Vue, reusable components
- Python code/biolink
- Web APIs
- Release of PAINT annotations
- Release of SynGO annotations
Participants
Traveling
- Seth Carbon LBL
- Chris Mungall LBL
- Eric Douglass LBL
- Ben Good LBL
- Deepak Unni LBL
- Suzi Lewis LBL
USC
- Anushya Muruganujan
- Tremayne Mushayahama
- Dustin Ebert
- Huaiyu Mi
- Paul Thomas