2 June 2020 PAINT Conference Call: Difference between revisions

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Revision as of 06:32, 2 June 2020

Present

Discussion points

June GO release: with PANTHER 15


Following up on previous actions

Update on Obsolete filtering obsolete Uniprot entries at each PAINT release

https://github.com/pantherdb/fullgo_paint_update/issues/46


Update on Taxon constraints

The test version is available at http://panthertest3.med.usc.edu:8083/

We plan to release it before the GO meeting.

Questions discussed last time:

  1. What to do when TC is violated in the experimental annotation? Example:http://amigo.geneontology.org/amigo/gene_product/FB:FBgn0003507
  2. What to do when incorrect qualifier is used? Example: http://amigo.geneontology.org/amigo/gene_product/MGI:MGI:2137670
  3. Taxon constraint file may not be perfect.