5 Jan 2021 PAINT Conference Call
Present
Discussion points
- PANT tool and validator update (Anushya)
- Update on the monthly update process (Dustin)
- Separation of GO vs PAINT update code
- UniProt GPI crosscheck - GH issue https://github.com/pantherdb/fullgo_paint_update/issues/46
- Report example showing effect of UniProt GPI check - https://docs.google.com/spreadsheets/d/1C66FkRPi8UShItoA5PyBUTRhzGPB-fWJowJy6hJrUh8/edit#gid=1722983311
- GAF 2.2 available
- Need to develop GPAD 2.0 IBA files - need to create GH ticket
- From Alex I: Could we go back to having only the PTN in the 'with' data ? Since this can end up being a lot of data. Ideally AmiGO and other tools would link to Pantree to get the primary annotations. Thoughts ?
- Improve annotation forward tracking. This is a topic we discussed at the last call. Sometimes nodes are not tracked between PANTHER builds due to the current rules. Huaiyu has proposal to improve the rules, and will discuss here.
- Plan to migrate PAINT to PANTHER 16.