5 May 2020 PAINT Conference Call
Following up on previous actions
Obsolete Uniprot entries should be filtered at each PAINT release
Pascale created a ticket: https://github.com/pantherdb/fullgo_paint_update/issues/46
Alex linked the PAINT error report; is this enough to implement the filter ?
The test version is available at http://panthertest3.med.usc.edu:8083/
We plan to release it before the GO meeting.
- What to do when TC is violated in the experimental annotation? Example:http://amigo.geneontology.org/amigo/gene_product/FB:FBgn0003507
- What to do when incorrect qualifier is used? Example: http://amigo.geneontology.org/amigo/gene_product/MGI:MGI:2137670
- Taxon constraint file may not be perfect.
GAF 2.2 more qualifiers
How are we going to handle these in PAINT?