7 Jan 2020 PAINT Conference Call: Difference between revisions
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2. I would like to discuss the ID space that we use - for example for AspGD we are using UniProt, so Aspergillus has some annotations as ASPDG IDs, and IBAs as UniProt. We should be using a single ID space for each species. | 2. I would like to discuss the ID space that we use - for example for AspGD we are using UniProt, so Aspergillus has some annotations as ASPDG IDs, and IBAs as UniProt. We should be using a single ID space for each species. | ||
See for example: | See for example: | ||
http://amigo.geneontology.org/amigo/gene_product/AspGD:ASPL0000109327 | * http://amigo.geneontology.org/amigo/gene_product/AspGD:ASPL0000109327 | ||
http://amigo.geneontology.org/amigo/gene_product/UniProtKB:E9R876 | * http://amigo.geneontology.org/amigo/gene_product/UniProtKB:E9R876 | ||
3. Taxon constraints in PAINT | 3. Taxon constraints in PAINT | ||
Revision as of 13:10, 7 January 2020
Present
Pascale, Huaiyu, Dustin, Anushya
Discussion points
1. I think Dustin has some data/forward tracking issues he’d like to discuss: Dustin, would you please list those or send links to tickets ?
2. I would like to discuss the ID space that we use - for example for AspGD we are using UniProt, so Aspergillus has some annotations as ASPDG IDs, and IBAs as UniProt. We should be using a single ID space for each species.
See for example:
- http://amigo.geneontology.org/amigo/gene_product/AspGD:ASPL0000109327
- http://amigo.geneontology.org/amigo/gene_product/UniProtKB:E9R876
3. Taxon constraints in PAINT