Difference between revisions of "AHWG-20080304"

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(New page: ===Present=== Seth ===Time=== ~? minutes ==Agenda== * qualifiers * show ref gen graphs ==Previous Action Items== * Release AmiGO ===Discussion=== * ===Action Items=== * [[Category...)
 
 
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===Present===
 
===Present===
Seth
+
Seth Mary Amelia Chris Ben Rama
  
 
===Time===
 
===Time===
~? minutes
+
~30 minutes
  
 
==Agenda==
 
==Agenda==
Line 15: Line 15:
  
 
===Discussion===
 
===Discussion===
*  
+
 
 +
* qualifiers' mockup
 +
** tomorrow (amelia)
 +
 
 +
* send notes along to software group (chris)
 +
** amigo data structs (amelia)
 +
** ref gen and DBIx::Class (seth)
 +
 
 +
* ref genome graph
 +
** look at other options
 +
*** look at cytoscape (ben)
 +
*** through the obo-edit code (chris)
 +
** additions for demo
 +
*** toggle between direct and indirect
 +
*** different views for ISS and the five experimental codes
 +
 
 +
* short discussion of DBIx:Class and performance issues
 +
** views help
 +
** haven't tried prefetch and other methods yet
 +
** ben will keep us posted on his experiments
  
 
===Action Items===
 
===Action Items===
*
+
 
 +
* release AmiGO
  
 
[[Category:AmiGO Hub]]
 
[[Category:AmiGO Hub]]

Latest revision as of 09:50, 4 March 2008

Present

Seth Mary Amelia Chris Ben Rama

Time

~30 minutes

Agenda

  • qualifiers
  • show ref gen graphs

Previous Action Items

  • Release AmiGO

Discussion

  • qualifiers' mockup
    • tomorrow (amelia)
  • send notes along to software group (chris)
    • amigo data structs (amelia)
    • ref gen and DBIx::Class (seth)
  • ref genome graph
    • look at other options
      • look at cytoscape (ben)
      • through the obo-edit code (chris)
    • additions for demo
      • toggle between direct and indirect
      • different views for ISS and the five experimental codes
  • short discussion of DBIx:Class and performance issues
    • views help
    • haven't tried prefetch and other methods yet
    • ben will keep us posted on his experiments

Action Items

  • release AmiGO