AHWG-20081104

Present

Seth, Suzi, Siddartha, Pascale, Edith, Michael (Princeton), Amelia, Chris, Rama, ...

Time

~60 min.

Agenda

Largely a repeat from last time.

• Review the RG display (examples)
  • http://ash.lbl.gov/cgi-bin/amigo/amigo?mode=homolset_summary
  • http://ash.lbl.gov/cgi-bin/amigo/amigo?mode=homolset_annotation&set=307
  • http://ash.lbl.gov/cgi-bin/amigo/amigo?mode=homolset_graph&set=307&format=svg
• How is dual taxon going?

Discussion

• summary
  • green turns blue
  • action item chris to remind ev code group
  • no anno or off anno
  • an empty cell means that no homolog has been found in that organism
  • text-only is a homolog means that ... (get suzi to say it again)
  • fix species names for latin
  • pre-render each column, and then add on fly
  • title bar title.
  • caps on index?
• details
  • (buggy--deferred for next week at RG)
• graph
  • don't like inferred
    • ...
  • link to help
  • "global ev"
    • could be filtered?
  • exp and iss clarification (key?)
  • maybe exp and iss as corona?
  • make coverage just a toggle box and always have direct?

Action Items

• make changes outlined above in discussion before RG meeting (seth)
• fix for IDA bug (seth)
• release SOP wishlist (seth)
  • then ask ben
• indentured testing
  • name to feature mapping
  • a week's heads up
• assign pages to people (when the time comes for 1.6) (Seth)

Previous and Ongoing Action Items

• discuss SOP when we have more people
• send notes along to software group
  • amigo data structs (amelia)
  • ref gen and DBIx::Class (seth)
• put all new stuff in next release tracker (seth)
• clean tracker more