Difference between revisions of "Agenda for CAF/CAT Meeting"

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(Tuesday, June 5th, 2012)
 
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[[Category:Common Annotation Framework]]
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[[https://docs.google.com/document/d/1GB33Dz1GMDCv5aY1KcbebMXHrKa9676cyjNhxKrgSII/edit Minutes]]
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===Monday, June 4th, 2012===
 
===Monday, June 4th, 2012===
  
*8:00 a.m. to 12 noon -- 151 Braun
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'''Meeting Time, Location'''
 +
*9:00 a.m. to 12 noon -- 151 Braun
 
*There is a meeting scheduled from 12 to 1:30 in 151 Braun, so if we use that time as a lunch break, we can come back to Braun from 1:30 to 5:00.   
 
*There is a meeting scheduled from 12 to 1:30 in 151 Braun, so if we use that time as a lunch break, we can come back to Braun from 1:30 to 5:00.   
 
*12 noon to 5:00 p.m. -- Morgan Library (if place of 151 Braun, if needed)
 
*12 noon to 5:00 p.m. -- Morgan Library (if place of 151 Braun, if needed)
  
*Overview of Requirements
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'''Discussion'''
**User Requirements - Kimberly
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*Articulating Requirements
***Summary of usre requirements based on interviews with GO curators at individual projects/MODs
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**User Requirements - Kimberly [[Media:CAT-user-requirements.pdf]]
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***Summary of user requirements based on interviews with GO curators at individual projects/MODs
 
**Developer Requirements - Chris
 
**Developer Requirements - Chris
 
***Overall software architecture
 
***Overall software architecture
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**Modeling a GO Annotation - all
 
**Modeling a GO Annotation - all
 
***Business as usual annotations
 
***Business as usual annotations
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***PAINT - phylogenetic-based annotations
 
***LEGO - more expressive annotations
 
***LEGO - more expressive annotations
  
 
===Tuesday, June 5th, 2012===
 
===Tuesday, June 5th, 2012===
  
*8:00 a.m. to 5:00 p.m. -- 151 Braun
 
  
 +
'''Meeting Time, Location'''
 +
*9:00 a.m. to 5:00 p.m. -- 151 Braun
 +
 +
'''Rules Engine'''
 +
 +
 +
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'''Discussion'''
 
*Code Review of Existing Tools, Services
 
*Code Review of Existing Tools, Services
 
**Protein2GO
 
**Protein2GO
**Web services
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**CANTO
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**PAINT
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**GO web services
 
**TermGenie
 
**TermGenie
 
**NLP Tools
 
**NLP Tools
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 +
*Assessment
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**What parts/modules can we incorporate right away?
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**What parts/modules will need to be developed?
  
 
===Wednesday, June 6th, 2012===
 
===Wednesday, June 6th, 2012===
  
*8:00 a.m. to 1:00 p.m. -- 101 Kerckhoff
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'''Meeting Time, Location'''
 +
*9:00 a.m. to 1:00 p.m. -- 101 Kerckhoff
 
*If we take lunch from 1 to 2:00 p.m., we can return to 101 Kerckhoff for the afternoon.
 
*If we take lunch from 1 to 2:00 p.m., we can return to 101 Kerckhoff for the afternoon.
 
*2:00 pm to 5:00 pm -- 101 Kerkchoff
 
*2:00 pm to 5:00 pm -- 101 Kerkchoff
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===Thursday, June 7th, 2012===
 
===Thursday, June 7th, 2012===
  
*8:00 a.m. to 4:00 p.m. -- 101 Kerckhoff
+
 
 +
'''Meeting Time, Location'''
 +
*9:00 a.m. to 4:00 p.m. -- 101 Kerckhoff
 
*4:00 p.m. to 5:00 p.m. -- Morgan Library (if needed)
 
*4:00 p.m. to 5:00 p.m. -- Morgan Library (if needed)
  
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===Friday, June 8th, 2012===
 
===Friday, June 8th, 2012===
  
*8:00 a.m. to 12 noon -- Morgan Library
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*Friday afternoon - open
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'''Meeting Time, Location'''
 +
*9:00 a.m. to 5 p.m Braun 151
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[http://wiki.geneontology.org/index.php/Common_Annotation_Framework_Specification Common Annotation Framework Specification]
 
[http://wiki.geneontology.org/index.php/Common_Annotation_Framework_Specification Common Annotation Framework Specification]

Latest revision as of 10:22, 9 April 2014

[Minutes]

Monday, June 4th, 2012

Meeting Time, Location

  • 9:00 a.m. to 12 noon -- 151 Braun
  • There is a meeting scheduled from 12 to 1:30 in 151 Braun, so if we use that time as a lunch break, we can come back to Braun from 1:30 to 5:00.
  • 12 noon to 5:00 p.m. -- Morgan Library (if place of 151 Braun, if needed)

Discussion

  • Articulating Requirements
    • User Requirements - Kimberly Media:CAT-user-requirements.pdf
      • Summary of user requirements based on interviews with GO curators at individual projects/MODs
    • Developer Requirements - Chris
      • Overall software architecture
      • Identification of major modules
      • Repository, data storage
    • Modeling a GO Annotation - all
      • Business as usual annotations
      • PAINT - phylogenetic-based annotations
      • LEGO - more expressive annotations

Tuesday, June 5th, 2012

Meeting Time, Location

  • 9:00 a.m. to 5:00 p.m. -- 151 Braun

Rules Engine


Discussion

  • Code Review of Existing Tools, Services
    • Protein2GO
    • CANTO
    • PAINT
    • GO web services
    • TermGenie
    • NLP Tools
  • Assessment
    • What parts/modules can we incorporate right away?
    • What parts/modules will need to be developed?

Wednesday, June 6th, 2012

Meeting Time, Location

  • 9:00 a.m. to 1:00 p.m. -- 101 Kerckhoff
  • If we take lunch from 1 to 2:00 p.m., we can return to 101 Kerckhoff for the afternoon.
  • 2:00 pm to 5:00 pm -- 101 Kerkchoff


Thursday, June 7th, 2012

Meeting Time, Location

  • 9:00 a.m. to 4:00 p.m. -- 101 Kerckhoff
  • 4:00 p.m. to 5:00 p.m. -- Morgan Library (if needed)


Friday, June 8th, 2012

Meeting Time, Location

  • 9:00 a.m. to 5 p.m Braun 151


Common Annotation Framework Specification