Difference between revisions of "Agenda for CAF/CAT Meeting"

From GO Wiki
Jump to: navigation, search
(→‎Tuesday, June 5th, 2012)
 
(15 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 +
[[Category:Common Annotation Framework]]
 +
[[https://docs.google.com/document/d/1GB33Dz1GMDCv5aY1KcbebMXHrKa9676cyjNhxKrgSII/edit Minutes]]
 +
 
===Monday, June 4th, 2012===
 
===Monday, June 4th, 2012===
  
−
*8:00 a.m. to 12 noon -- 151 Braun
+
'''Meeting Time, Location'''
 +
*9:00 a.m. to 12 noon -- 151 Braun
 
*There is a meeting scheduled from 12 to 1:30 in 151 Braun, so if we use that time as a lunch break, we can come back to Braun from 1:30 to 5:00.   
 
*There is a meeting scheduled from 12 to 1:30 in 151 Braun, so if we use that time as a lunch break, we can come back to Braun from 1:30 to 5:00.   
 
*12 noon to 5:00 p.m. -- Morgan Library (if place of 151 Braun, if needed)
 
*12 noon to 5:00 p.m. -- Morgan Library (if place of 151 Braun, if needed)
  
−
*Overview of Requirements
+
'''Discussion'''
−
**User Requirements - Kimberly
+
*Articulating Requirements
−
***Summary of usre requirements based on interviews with GO curators at individual projects/MODs
+
**User Requirements - Kimberly [[Media:CAT-user-requirements.pdf]]
 +
***Summary of user requirements based on interviews with GO curators at individual projects/MODs
 
**Developer Requirements - Chris
 
**Developer Requirements - Chris
 
***Overall software architecture
 
***Overall software architecture
Line 14: Line 19:
 
**Modeling a GO Annotation - all
 
**Modeling a GO Annotation - all
 
***Business as usual annotations
 
***Business as usual annotations
 +
***PAINT - phylogenetic-based annotations
 
***LEGO - more expressive annotations
 
***LEGO - more expressive annotations
  
 
===Tuesday, June 5th, 2012===
 
===Tuesday, June 5th, 2012===
  
−
*8:00 a.m. to 5:00 p.m. -- 151 Braun
 
  
 +
'''Meeting Time, Location'''
 +
*9:00 a.m. to 5:00 p.m. -- 151 Braun
 +
 +
'''Rules Engine'''
 +
 +
 +
 +
'''Discussion'''
 
*Code Review of Existing Tools, Services
 
*Code Review of Existing Tools, Services
 
**Protein2GO
 
**Protein2GO
−
**Web services
+
**CANTO
 +
**PAINT
 +
**GO web services
 
**TermGenie
 
**TermGenie
 
**NLP Tools
 
**NLP Tools
Line 32: Line 47:
 
===Wednesday, June 6th, 2012===
 
===Wednesday, June 6th, 2012===
  
−
*8:00 a.m. to 1:00 p.m. -- 101 Kerckhoff
+
'''Meeting Time, Location'''
 +
*9:00 a.m. to 1:00 p.m. -- 101 Kerckhoff
 
*If we take lunch from 1 to 2:00 p.m., we can return to 101 Kerckhoff for the afternoon.
 
*If we take lunch from 1 to 2:00 p.m., we can return to 101 Kerckhoff for the afternoon.
 
*2:00 pm to 5:00 pm -- 101 Kerkchoff
 
*2:00 pm to 5:00 pm -- 101 Kerkchoff
Line 39: Line 55:
 
===Thursday, June 7th, 2012===
 
===Thursday, June 7th, 2012===
  
−
*8:00 a.m. to 4:00 p.m. -- 101 Kerckhoff
+
 
 +
'''Meeting Time, Location'''
 +
*9:00 a.m. to 4:00 p.m. -- 101 Kerckhoff
 
*4:00 p.m. to 5:00 p.m. -- Morgan Library (if needed)
 
*4:00 p.m. to 5:00 p.m. -- Morgan Library (if needed)
  
Line 45: Line 63:
 
===Friday, June 8th, 2012===
 
===Friday, June 8th, 2012===
  
−
*8:00 a.m. to 12 noon -- Morgan Library
+
 
−
*Friday afternoon - open
+
'''Meeting Time, Location'''
 +
*9:00 a.m. to 5 p.m Braun 151
 +
 
  
  
 
[http://wiki.geneontology.org/index.php/Common_Annotation_Framework_Specification Common Annotation Framework Specification]
 
[http://wiki.geneontology.org/index.php/Common_Annotation_Framework_Specification Common Annotation Framework Specification]

Latest revision as of 10:22, 9 April 2014

[Minutes]

Monday, June 4th, 2012

Meeting Time, Location

  • 9:00 a.m. to 12 noon -- 151 Braun
  • There is a meeting scheduled from 12 to 1:30 in 151 Braun, so if we use that time as a lunch break, we can come back to Braun from 1:30 to 5:00.
  • 12 noon to 5:00 p.m. -- Morgan Library (if place of 151 Braun, if needed)

Discussion

  • Articulating Requirements
    • User Requirements - Kimberly Media:CAT-user-requirements.pdf
      • Summary of user requirements based on interviews with GO curators at individual projects/MODs
    • Developer Requirements - Chris
      • Overall software architecture
      • Identification of major modules
      • Repository, data storage
    • Modeling a GO Annotation - all
      • Business as usual annotations
      • PAINT - phylogenetic-based annotations
      • LEGO - more expressive annotations

Tuesday, June 5th, 2012

Meeting Time, Location

  • 9:00 a.m. to 5:00 p.m. -- 151 Braun

Rules Engine


Discussion

  • Code Review of Existing Tools, Services
    • Protein2GO
    • CANTO
    • PAINT
    • GO web services
    • TermGenie
    • NLP Tools
  • Assessment
    • What parts/modules can we incorporate right away?
    • What parts/modules will need to be developed?

Wednesday, June 6th, 2012

Meeting Time, Location

  • 9:00 a.m. to 1:00 p.m. -- 101 Kerckhoff
  • If we take lunch from 1 to 2:00 p.m., we can return to 101 Kerckhoff for the afternoon.
  • 2:00 pm to 5:00 pm -- 101 Kerkchoff


Thursday, June 7th, 2012

Meeting Time, Location

  • 9:00 a.m. to 4:00 p.m. -- 101 Kerckhoff
  • 4:00 p.m. to 5:00 p.m. -- Morgan Library (if needed)


Friday, June 8th, 2012

Meeting Time, Location

  • 9:00 a.m. to 5 p.m Braun 151


Common Annotation Framework Specification

Retrieved from "http://wiki.geneontology.org/index.php?title=Agenda_for_CAF/CAT_Meeting&oldid=49529"