Agenda for CAF/CAT Meeting: Difference between revisions

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[[Category:Common Annotation Framework]]
[[https://docs.google.com/document/d/1GB33Dz1GMDCv5aY1KcbebMXHrKa9676cyjNhxKrgSII/edit Minutes]]
===Monday, June 4th, 2012===
===Monday, June 4th, 2012===


'''Meeting Time, Location'''
'''Meeting Time, Location'''
*8:00 a.m. to 12 noon -- 151 Braun
*9:00 a.m. to 12 noon -- 151 Braun
*There is a meeting scheduled from 12 to 1:30 in 151 Braun, so if we use that time as a lunch break, we can come back to Braun from 1:30 to 5:00.   
*There is a meeting scheduled from 12 to 1:30 in 151 Braun, so if we use that time as a lunch break, we can come back to Braun from 1:30 to 5:00.   
*12 noon to 5:00 p.m. -- Morgan Library (if place of 151 Braun, if needed)
*12 noon to 5:00 p.m. -- Morgan Library (if place of 151 Braun, if needed)
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'''Discussion'''
'''Discussion'''
*Articulating Requirements
*Articulating Requirements
**User Requirements - Kimberly
**User Requirements - Kimberly [[Media:CAT-user-requirements.pdf]]
***Summary of usre requirements based on interviews with GO curators at individual projects/MODs
***Summary of user requirements based on interviews with GO curators at individual projects/MODs
**Developer Requirements - Chris
**Developer Requirements - Chris
***Overall software architecture
***Overall software architecture
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**Modeling a GO Annotation - all
**Modeling a GO Annotation - all
***Business as usual annotations
***Business as usual annotations
***PAINT - phylogenetic-based annotations
***LEGO - more expressive annotations
***LEGO - more expressive annotations


===Tuesday, June 5th, 2012===
===Tuesday, June 5th, 2012===
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'''Meeting Time, Location'''
'''Meeting Time, Location'''
*8:00 a.m. to 5:00 p.m. -- 151 Braun
*9:00 a.m. to 5:00 p.m. -- 151 Braun
 
'''Rules Engine'''
 




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*Code Review of Existing Tools, Services
*Code Review of Existing Tools, Services
**Protein2GO
**Protein2GO
**Web services
**CANTO
**PAINT
**GO web services
**TermGenie
**TermGenie
**NLP Tools
**NLP Tools
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**What parts/modules can we incorporate right away?
**What parts/modules can we incorporate right away?
**What parts/modules will need to be developed?
**What parts/modules will need to be developed?


===Wednesday, June 6th, 2012===
===Wednesday, June 6th, 2012===


'''Meeting Time, Location'''
'''Meeting Time, Location'''
*8:00 a.m. to 1:00 p.m. -- 101 Kerckhoff
*9:00 a.m. to 1:00 p.m. -- 101 Kerckhoff
*If we take lunch from 1 to 2:00 p.m., we can return to 101 Kerckhoff for the afternoon.
*If we take lunch from 1 to 2:00 p.m., we can return to 101 Kerckhoff for the afternoon.
*2:00 pm to 5:00 pm -- 101 Kerkchoff
*2:00 pm to 5:00 pm -- 101 Kerkchoff
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'''Meeting Time, Location'''
'''Meeting Time, Location'''
*8:00 a.m. to 4:00 p.m. -- 101 Kerckhoff
*9:00 a.m. to 4:00 p.m. -- 101 Kerckhoff
*4:00 p.m. to 5:00 p.m. -- Morgan Library (if needed)
*4:00 p.m. to 5:00 p.m. -- Morgan Library (if needed)


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'''Meeting Time, Location'''
'''Meeting Time, Location'''
*8:00 a.m. to 12 noon -- Morgan Library
*9:00 a.m. to 5 p.m Braun 151
*Friday afternoon - open
 




[http://wiki.geneontology.org/index.php/Common_Annotation_Framework_Specification Common Annotation Framework Specification]
[http://wiki.geneontology.org/index.php/Common_Annotation_Framework_Specification Common Annotation Framework Specification]

Latest revision as of 14:22, 9 April 2014

[Minutes]

Monday, June 4th, 2012

Meeting Time, Location

  • 9:00 a.m. to 12 noon -- 151 Braun
  • There is a meeting scheduled from 12 to 1:30 in 151 Braun, so if we use that time as a lunch break, we can come back to Braun from 1:30 to 5:00.
  • 12 noon to 5:00 p.m. -- Morgan Library (if place of 151 Braun, if needed)

Discussion

  • Articulating Requirements
    • User Requirements - Kimberly Media:CAT-user-requirements.pdf
      • Summary of user requirements based on interviews with GO curators at individual projects/MODs
    • Developer Requirements - Chris
      • Overall software architecture
      • Identification of major modules
      • Repository, data storage
    • Modeling a GO Annotation - all
      • Business as usual annotations
      • PAINT - phylogenetic-based annotations
      • LEGO - more expressive annotations

Tuesday, June 5th, 2012

Meeting Time, Location

  • 9:00 a.m. to 5:00 p.m. -- 151 Braun

Rules Engine


Discussion

  • Code Review of Existing Tools, Services
    • Protein2GO
    • CANTO
    • PAINT
    • GO web services
    • TermGenie
    • NLP Tools
  • Assessment
    • What parts/modules can we incorporate right away?
    • What parts/modules will need to be developed?

Wednesday, June 6th, 2012

Meeting Time, Location

  • 9:00 a.m. to 1:00 p.m. -- 101 Kerckhoff
  • If we take lunch from 1 to 2:00 p.m., we can return to 101 Kerckhoff for the afternoon.
  • 2:00 pm to 5:00 pm -- 101 Kerkchoff


Thursday, June 7th, 2012

Meeting Time, Location

  • 9:00 a.m. to 4:00 p.m. -- 101 Kerckhoff
  • 4:00 p.m. to 5:00 p.m. -- Morgan Library (if needed)


Friday, June 8th, 2012

Meeting Time, Location

  • 9:00 a.m. to 5 p.m Braun 151


Common Annotation Framework Specification