Agenda for Kidney Content Meeting: Difference between revisions
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| Kidney precursor cells and tissues (segmentation)<br/>* Development of kidney field <br/>* Mesonephric mesenchyme-epithelial transition <br/>* proximal/distal nephron patterning specification of proximal tubule identity; specification of intermediate tubule identity; | | Kidney precursor cells and tissues (segmentation)<br/>* Development of kidney field <br/>* Nephrogenic stem cell differentiation (Defn: The process whereby a relatively unspecialized cell acquires specialized features of a nephrogenic stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells). | ||
specification of distal tubule identity; pronephros proximal/distal patterning; pronephros development; | <br/>* Commitment of multipotent stem cells to the nephrogenic lineage (Defn: The initial commitment of cells whereby the developmental fate of a cell becomes restricted such that it will develop into some type of cell in the nephron). <br/>* Mesenchymal cell condensation involved in nephron development (Defn: the cell adhesion process by which nephron precursor mesenchyme cells adhere to one another to form the pretubular aggregate in the initial stages of nephron development). <br/>* chemoattraction of in mesenchymal cells involved in nephron development (Defn: not sure if there is sufficient evidence for the involvement of chemotaxis in the formation of the pretubular aggregate) <br/>* Sensing a quorum of cells / control of the number of cells in a cell group <br/>* (Mesonephric/metanephric) mesenchyme-epithelial transition <br/>* proximal/distal nephron patterning specification of proximal tubule identity; specification of intermediate tubule identity; <br/>* Formation of tight junctions, <br/>* Formation of adherens junctions, <br/>* Formation of basement membrane, <br/>* Epithelial patterning of the nephron epithelium {Syn: segmentation of the nephron epithelium},<br/>* specification of distal tubule identity; pronephros proximal/distal patterning; pronephros development; pronephros proximal/distal patterning, <br/>*SF - | ||
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Revision as of 06:07, 24 November 2009
Please suggest agenda items, relevant papers and other information relating to kidney development GO terms that you would like discussed at this workshop, to enable us to form an agenda.
Participants
GO annotators | GO Editors | Kidney Development Experts |
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Dr Yasmin Alam-Faruque (GOA) Dr Emily Dimmer (GOA) Dr Rebecca Foulger (UniProt/Xenopus) Dr Susan Tweedie (Flybase) Dr Rachael Huntley (GOA) |
Dr Midori Harris Dr David Hill |
Professor Adrian Woolf Professor Jamie Davies Dr Duncan Davidson |
Location
EMBL-EBI, The Wellcome Trust Genome Campus, Room C202/203 - shared facilities. Date: Monday 25th January 2010, 9:30am to 5pm
Programme
9:15am | Tea/ Coffee and biscuits | ||
9:30am | Welcome and introduction | Yasmin | |
9:35am | Introduction to GO | David Hill | |
9:45am | Kidney precursor cells and tissues (segmentation) * Development of kidney field * Nephrogenic stem cell differentiation (Defn: The process whereby a relatively unspecialized cell acquires specialized features of a nephrogenic stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells).
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11am | Coffee break | ||
11:45am | Kidney morphogenesis - Kidney structure formation * ureteric bud specification/differentiation/development, *mesenchymal cap epithelium, *mesonephric tubule (anterior and posterior in mouse), * SF - |
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12:30pm | Lunch | ||
2pm | Anatomical structure development *Macula densa development *nephric duct/ tubule specification, differentiation, morphogenesis * morphogenic and migratory changes to those cell populations as they move towards formation of the nephric tube *Collecting duct system development Connecting tubule development *Loop of Henle formation/development/differentiation (thin descending limb development, thin ascending limb development, Thick ascending limb |
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2:45pm | kidney proximal tubule development; proximal convoluted tubule development; specification of proximal tubule identity *kidney intermediate tubule development; thin descending limb development; thin ascending limb development; specification of intermediate tubule identity *kidney distal tubule developmentCollecting duct formation/development/differentiation; thick ascending limb development; distal convoluted tubule development; specification of distal tubule identity *SF- |
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3:30pm | Coffee break | ||
4pm | * Glomerulus formation/development/differentiation * SF - |
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5pm | Close |
Minutes
Current Kidney Development Ontology Terms
The currently available kidney development process ontology (November 2009)
[[1]]
*GO:0001656 GO:0001657 GO:0001658 GO:0001822 GO:0001823 GO:0032835 GO:0032836 GO:0034671 GO:0034672 GO:0048793 GO:0060675 GO:0060676 GO:0060677 GO:0060678 GO:0060679 GO:0060680 GO:0060681 GO:0060682
Relevant papers and other resources
Mouse Anatomy Browser - [2]
FMA human anatomy browser- [3]
GUDMAP browser - [4]; Metanephros [5]; renal vesicle [6]
Other reviews