AmiGO

Welcome to AmiGO's wiki home on the web. This is the central public repository for AmiGO news, help, manuals, articles, technical information, and working group information.

News

A new version of AmiGO is currently being tested. It can be found at the BBOP testing site.[1]

Help

There are no AmiGO specific help pages at this time, but you might want to consider the GO Helpdesk.

Manuals

General AmiGO Help

AmiGO is a web based application which allows the user to browse, query, and visualize data from the Gene Ontology, or any ontology in OBO format. AmiGO can be accessed online. AmiGO is open source software and can be downloaded and installed as part of the go-dev CVS repository from the Gene Ontology SourceForge.net page.

Overview

A general overview of AmiGO and it's abilities. Go here to ger orientation for AmiGO.

Database Filter

A database filtering to the use and meaning of the database filters used by AmiGO when interacting with the GO database.

AmiGO Component Help

AmiGO is broken in several discrete components that interact with each other. Below is specific help and instructions for each

Term Details

Term details blurb...

Gene Product Details

Gene product details blurb...

Bar Chart Details

Bar chart blurb...

BLAST

The AmiGO BLAST tool (formerly known as GOst) can be used to...

Term Enrichment

The AmiGO Term Enrichment tool can be used to...

Slimmer

The AmiGO Slimmer tool can be used to...

Articles

None at this time.

Technical articles

There are no technical articles at this time, but some of the information on the database schema might be interesting.

Working Group Information

Try the Web Presence Working Group