AmiGO: Specifications: Difference between revisions

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[[Category:AmiGO working group]]
[[Category:AmiGO working group]]
I like how we have mockups without specifications.
Here are some bare bones specifications:
AmiGO has two primary purposes: 
1.  Browsing the ontology
2.  Displaying annotations (mappings) of Genes to GO terms
The current implementation has 3 different searching approaches to access this data:
* search by term name
* search by gene name/id
* Blast vs annotated sequences (GOst)
GOst can also be used internally from a particular annotated sequence

Revision as of 20:11, 18 September 2006

Specifications for future releases of AmiGO. See the AmiGO mock ups page for implementations of these specifications.

I like how we have mockups without specifications.

Here are some bare bones specifications:

AmiGO has two primary purposes:

1. Browsing the ontology

2. Displaying annotations (mappings) of Genes to GO terms

The current implementation has 3 different searching approaches to access this data:

  • search by term name
  • search by gene name/id
  • Blast vs annotated sequences (GOst)


GOst can also be used internally from a particular annotated sequence