AmiGO 1 6 (Archived): Difference between revisions

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== Other ==
== Other ==


* most new features make use of the new DBIx::Class-based API
* most new features make use of the new DBIx::Class-based API on a CGI::Application base
**  
** improved speed
** improved clarity
* first use of automated web testing (tanuki)
* first use of automated web testing (tanuki)
** tens of thousands page visits
** tens of thousands page visits

Revision as of 20:20, 17 October 2008

Status

Currently beta

New Features

Community annotation

  • Round trip through GONuts.
  • Real-time participation

Reference Genome Support

  • Includes full support for Reference Genome displays
    • Links in from AmiGO
      • gene product search page
      • gene product details page
    • Details
      • details of evidence type
      • sortable
    • Vizualizations
      • Cachable
      • Interative SVG
        • information from the details page
      • Static PNG
    • Summary
      • Cachable
      • evidence type groups

Current work

Deferred features

  • Organizing annotation results by qualifier
  • Term request client
  • Cross-product and inter-ontology link support (may be punted until following release, but we will start on necessary infrastructure changes)

Other

  • most new features make use of the new DBIx::Class-based API on a CGI::Application base
    • improved speed
    • improved clarity
  • first use of automated web testing (tanuki)
    • tens of thousands page visits
    • caught a fair number of bad links

Future work

  • Qualifiers in display
  • Term request client to SF
  • Lucene
    • complex search
      • boolean
      • distance
      • weight
    • graph information as well?
  • AmiGO 1.6 bi-ax test [1] (defunct?)