AmiGO 1 8: Difference between revisions
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[[Category:Software]] | |||
[[Category:AmiGO]] | |||
= Status = | = Status = | ||
Currently [http:// | Currently in [http://amigo1.geneontology.org production] (as of 20013-10-17). | ||
See [[AmiGO 2]] for the future beta. | |||
= New features = | = New features = | ||
Line 8: | Line 12: | ||
* GOOSE integrated into framework ([http://amigo.berkeleybop.org/cgi-bin/amigo/goose GOOSE]) | * GOOSE integrated into framework ([http://amigo.berkeleybop.org/cgi-bin/amigo/goose GOOSE]) | ||
* Rapid searching ([http://amigo.berkeleybop.org/cgi-bin/amigo/amigo?mode=live_search live search]) | * Rapid searching ([http://amigo.berkeleybop.org/cgi-bin/amigo/amigo?mode=live_search live search]) | ||
* New term details with improved graph view ([http://amigo.berkeleybop.org/cgi-bin/amigo/term_details?term=GO:0022008 term details for GO:0022008]) | |||
* Speed--new caching sub-system for several components (see above for example) | |||
= | = New experimental (beta) features = | ||
* [New] Static version of the Lucene search for fallback ([http://amigo.berkeleybop.org/cgi-bin/amigo/amigo_exp?mode=live_search_term term] [http://amigo.berkeleybop.org/cgi-bin/amigo/amigo_exp?mode=live_search_gene_product gene product]). | |||
* Matrix tool ([http://amigo.berkeleybop.org/cgi-bin/amigo/amigo_exp?mode=nmatrix nmatrix]) | * Matrix tool ([http://amigo.berkeleybop.org/cgi-bin/amigo/amigo_exp?mode=nmatrix nmatrix]) | ||
* Integrate new RG views from Sven ( | * Integrate new RG views from Sven (may be deferred) ([http://amigo.berkeleybop.org/cgi-bin/amigo/phylotree phylotree]) | ||
** Check licensing of JS tree viewer ([http://amigo.berkeleybop.org/cgi-bin/amigo/amigo_exp?mode=ntree ntree]) | ** Check licensing of JS tree viewer ([http://amigo.berkeleybop.org/cgi-bin/amigo/amigo_exp?mode=ntree ntree]) | ||
* Relation filtering (may be bumped to deferred) | * Relation filtering (may be bumped to deferred) | ||
** Start with term enrichment and work out | ** Start with term enrichment and work out | ||
= Known issues = | |||
Please see the [https://sourceforge.net/tracker/?group_id=36855&atid=908269 tracker]. | |||
Latest revision as of 17:56, 22 May 2014
Status
Currently in production (as of 20013-10-17).
See AmiGO 2 for the future beta.
New features
- Centralized internal testing (kappa)
- GOOSE integrated into framework (GOOSE)
- Rapid searching (live search)
- New term details with improved graph view (term details for GO:0022008)
- Speed--new caching sub-system for several components (see above for example)
New experimental (beta) features
- [New] Static version of the Lucene search for fallback (term gene product).
- Matrix tool (nmatrix)
- Integrate new RG views from Sven (may be deferred) (phylotree)
- Check licensing of JS tree viewer (ntree)
- Relation filtering (may be bumped to deferred)
- Start with term enrichment and work out
Known issues
Please see the tracker.