AmiGO help Gene Product Search Results: Difference between revisions

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This search is matching (where assigned) the database identifier, the primary gene product name, systematic identifier or any synonyms used to refer to the gene product.
This search is matching (where assigned) the database identifier, the primary gene product name, systematic identifier or any synonyms used to refer to the gene product.


The results are a list of matched 'gene product names', and the source organism
The results are a list of the 'gene product names', and the source organism


Clicking on a 'gene product name' takes you to the "Gene Product Details" page. This page provides further information about the individual search hits including:
Clicking on a 'gene product name' takes you to the "Gene Product Details" page. This page provides further information about the individual search hits including:
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Notes:
Notes:
*1. This documentation will need to be updated when the search results relevence is implemented
*1. This documentation will need to be updated when the search results relevence is implemented
*2. I haven't yet documented the check boxes as it seems likely that these will disappear
*3. Not much else to say about this....in fact I have probably put too much about the "Gene Product Details" page!




# direct users to the advanced query if they want to put in a db identifier, etc.
# direct users to the advanced query if they want to put in a db identifier, etc.
# explain how to filter the search results, and what the filters are acting on (i.e. species and db filters are based on info about the gene products, but ontology and ev code filters are based on the terms associated with the gene product). Also say that you can select multiple options in each set
# explain how to filter the search results, and what the filters are acting on (i.e. species and db filters are based on info about the gene products, but ontology and ev code filters are based on the terms associated with the gene product). Also say that you can select multiple options in each set
# explain how you can get the fasta sequences

Revision as of 10:25, 4 December 2006

The "Gene Product Search Results" provides a list of gene products matching a 'gene symbols or names' search. This search is matching (where assigned) the database identifier, the primary gene product name, systematic identifier or any synonyms used to refer to the gene product.

The results are a list of the 'gene product names', and the source organism

Clicking on a 'gene product name' takes you to the "Gene Product Details" page. This page provides further information about the individual search hits including:

i) Gene product information, with database cross-references ii) Access to the protein sequence iii) All of the gene associations for the gene product.

If you would like to filter results based on source organism or originating database, use the 'Filter' option on the menu bar.

If you would like to search other fields (i.e. ***???) use the 'Advanced Query' option on the menu bar.

Notes:

  • 1. This documentation will need to be updated when the search results relevence is implemented


  1. direct users to the advanced query if they want to put in a db identifier, etc.
  2. explain how to filter the search results, and what the filters are acting on (i.e. species and db filters are based on info about the gene products, but ontology and ev code filters are based on the terms associated with the gene product). Also say that you can select multiple options in each set
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