Annotation 19Oct10

To-do list from past

• PAINT GAF

Rachael emailed Paul regarding linking to Panther subfamilies, e.g. PTHR11361_AN26, he says they will switch to linking to PanTree pages from their identifiers, e.g. in this format; http://pantree.org/node/annotationNode.jsp?id=PTHR11361_AN26 In future releases of the PAINT GAFs, they'll be using the stable tree node id (e.g. PTN000145507) instead, but the URL construction rules will be the same. The basic URL also works with the stable IDs, e.g. http://pantree.org/node/annotationNode.jsp?id=PTN000145507 already points to the same page as the PTHR11361_AN26 link above.

However, the xref_abbs file needs to be updated with the new PanTree URL, so we can start linking out to the subfamily pages - Rachael has emailed Paul about this. Suzi has now updated xref_abbs

• Inter-ontology inferences

• ECO proposal

Sent out for comment.

• QC checks

Priorities

• Documentation
  • Col-16

First draft; http://gocwiki.geneontology.org/index.php/Column_16:_Cell_Type

• Annotation jamboree

November 8th

• Soft QC checks

• Loading GAF files
  • help curators locate the file/SOP.

• Protein binding- what next?
  • Check with Managers