Project
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March 2010
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April 2010
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May 2010
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June 2010
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July 2010
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August 2010
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September 2010
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October 2010
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November 2010
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December 2010
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Jamborees for Reference Genome
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Ongoing
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Outreach to new groups
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document policy/guidelines for new annotating groups/jamborees (start)
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document policy/guidelines for new annotating groups/jamborees (finish)
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Enforce annotation guidelines (absolute checks-annotations are wrong)
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phase 1 QC checks for protein binding annotations
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request for QC checks (DONE)
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formulate phase 2 QC checks, come up with pipeline (schedule for running these scripts etc.)
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request for phase 2 QC checks
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phase 1 QC checks in production
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phase 2 QC checks in production
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Soft QC checks (annotations that need to be reviewed but not removed)
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gather specs for taxon triggers, matrix checks, other checks from annotation WGs
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formulate soft QC checks, come up with pipeline (schedule for running these scripts etc.)
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soft QC checks in production
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Documentation of annotation guidelines
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working groups formed (DONE)
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complete at GO Camp (DONE)
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guidelines in production
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Documentation of evidence code guidelines
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agreed to adopt a new evidence code system
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initiate conversation with ECO group and ?
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ratify IMP, RCA, IGI documentation
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work on details
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retrofit plan
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new ECO in production
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GAF file format
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guidelines for GAF2.0 (column 16)
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continue discussion on col-16 content at GO camp (DONE)
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Loading PAINT GAF files
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feedback
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discussion at GO camp
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incorporate PAINT inferences at MODs
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Loading other GAF files
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initiate talk with Chris about inter-ontology inferences
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send email out to MODs to review/give feedback
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establish pipeline (resting place, updating schedule etc.)
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incorporate inter-ontology inferences
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Educate curators on ontology development
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ongoing
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AmiGO/QuickGO displays
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ongoing
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